RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 DPYSQ14117 519 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 RFTN1Q14699 578 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 CYTH1Q15438 398 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 DPYSL2Q16555 572 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CA9Q16790 459 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 SKOR2Q2VWA4 1001 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 BOLA3Q53S33 107 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 PPP6R3Q5H9R7 873 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 CFAP58Q5T655 872 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 AFMIDQ63HM1 303 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 BRAT1Q6PJG6 821 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 DHRS13Q6UX07 377 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 Q6ZSR6 202 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 NYAP1Q6ZVC0 841 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 PARGQ86W56 976 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TMPRSS12Q86WS5 348 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ARHGAP12Q8IWW6 846 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 SLC25A45Q8N413 288 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 NIPA2Q8N8Q9 360 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 OR4C6Q8NH72 309 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CXorf40AQ8TE69 158 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CPLX3Q8WVH0 158 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TEKT4Q8WW24 435 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TSC1Q92574 1164 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CENPTQ96BT3 561 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CELF6Q96J87 481 aaKnown RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 EXOC2Q96KP1 924 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 BMFQ96LC9 184 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ZNF641Q96N77 438 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 ZNF599Q96NL3 588 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 TUBGCP5Q96RT8 1024 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 KCTD15Q96SI1 283 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 KLF6Q99612 283 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK3-219ENST00000567805 DUSP23Q9BVJ7 150 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CINPQ9BW66 212 aaPredicted RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 C1QTNF7Q9BXJ2 289 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 C1QTNF2Q9BXJ5 285 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 SLC39A8Q9C0K1 460 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 THAP2Q9H0W7 228 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 SUV39H2Q9H5I1 410 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ATP13A3Q9H7F0 1226 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 SP110Q9HB58 689 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK3-219ENST00000567805 NLGN3Q9NZ94 848 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 CWC15Q9P013 229 aaKnown RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 IFNKQ9P0W0 207 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 LHX3Q9UBR4 397 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 GGT7Q9UJ14 662 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ANAPC7Q9UJX3 599 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ITM2BQ9Y287 266 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 LUC7L2Q9Y383 392 aaKnown RBP4.84□□□□□ -1.63
CLK3-219ENST00000567805 PCDHGA10Q9Y5H3 936 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLK3-219ENST00000567805 ITPR1Q14643 2758 aa4.84□□□□□ -1.63
CLK3-219ENST00000567805 ADAMTS20P59510 1910 aa4.84□□□□□ -1.64
CLK3-219ENST00000567805 COL27A1Q8IZC6 1860 aaPredicted RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 A0A087X0T9 212 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SPTY2D1-AS1A0A0U1RR47 76 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 NEMP2A6NFY4 417 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SRRM3A6NNA2 597 aaPredicted RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 MYO1FO00160 1098 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 DFFAO00273 331 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 TRIM38O00635 465 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SCAMP1O15126 338 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 INSIG1O15503 277 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 CBFA2T2O43439 604 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SIGLEC6O43699 453 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SDC3O75056 442 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 PIAS2O75928 621 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 PIGNO95427 931 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 CSF2P04141 144 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 FAM228BP0C875 321 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 RARAP10276 462 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 CKMT1AP12532 417 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 NME1P15531 152 aaKnown RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 TCF4P15884 667 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 TIMP2P16035 220 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 XPAP23025 273 aaPredicted RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 IL1R2P27930 398 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SERPINA4P29622 427 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 HNRNPH3P31942 346 aaKnown RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 CASP14P31944 242 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SERPINB6P35237 376 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 IGFALSP35858 605 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 MMP12P39900 470 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 ARL4AP40617 200 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 RENBPP51606 427 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 PFN3P60673 137 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 YPEL5P62699 121 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 POLR2LP62875 67 aaKnown RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 E2F1Q01094 437 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SLC25A11Q02978 314 aaKnown RBP4.83□□□□□ -1.64
CLK3-219ENST00000567805 TRIM14Q14142 442 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 PTK2BQ14289 1009 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 FZD2Q14332 565 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 AGERQ15109 404 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 NFKBIBQ15653 356 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 UGP2Q16851 508 aa4.83□□□□□ -1.64
CLK3-219ENST00000567805 SMTNL2Q2TAL5 461 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms