RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 TSEN2Q8NCE0 465 aaKnown RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 CXorf40AQ8TE69 158 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TEKT4Q8WW24 435 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TSC1Q92574 1164 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 HSPH1Q92598 858 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 BTBD6Q96KE9 485 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 C1QTNF7Q9BXJ2 289 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 TSPY26PQ9H489 355 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ATP13A3Q9H7F0 1226 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 SP110Q9HB58 689 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ZNHIT6Q9NWK9 470 aaKnown RBP6.99□□□□□ -1.29
SF3B3-209ENST00000567635 DNAJC28Q9NX36 388 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 GGT7Q9UJ14 662 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ANAPC7Q9UJX3 599 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ZMIZ1Q9ULJ6 1067 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ITM2BQ9Y287 266 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 PCDHGA1Q9Y5H4 931 aa6.99□□□□□ -1.29
SF3B3-209ENST00000567635 ADAMTS20P59510 1910 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 CHD6Q8TD26 2715 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PKD1L2Q7Z442 2459 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TSPAN11A1L157 253 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TMEM110-MUSTN1A8MSY1 372 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TRIM38O00635 465 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TOR1BO14657 336 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SCAMP1O15126 338 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SIGLEC6O43699 453 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SDC3O75056 442 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 RFPL3O75679 317 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PIAS2O75928 621 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PIGNO95427 931 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 CSF2P04141 144 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TPM1P09493 284 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 H2AFZP0C0S5 128 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 JUPP14923 745 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TCF4P15884 667 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SERPINA4P29622 427 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SCNN1BP51168 640 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PFN3P60673 137 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 HNRNPKP61978 463 aaKnown RBP eCLIP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 YPEL5P62699 121 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 POLR2LP62875 67 aaKnown RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 BCL2L1Q07817 233 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 DNAJC3Q13217 504 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ILKQ13418 452 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PDE1CQ14123 709 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TRIM14Q14142 442 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PTK2BQ14289 1009 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 FZD2Q14332 565 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 KRT81Q14533 505 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 LBRQ14739 615 aaKnown RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SMAD1Q15797 465 aaKnown RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SLC18A3Q16572 532 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SMTNL2Q2TAL5 461 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ZNF542PQ5EBM4 170 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 LRRC73Q5JTD7 316 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 CFAP58Q5T655 872 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TMCO4Q5TGY1 634 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TXNRD3NBQ6F5E7 133 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ERAP2Q6P179 960 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 DHRS13Q6UX07 377 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ARHGAP36Q6ZRI8 547 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 H2AFVQ71UI9 128 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 LRRC49Q8IUZ0 686 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 TP53INP2Q8IXH6 220 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SLC22A18ASQ8N1D0 253 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PAF1Q8N7H5 531 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 KCTD6Q8NC69 237 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 DENND6BQ8NEG7 585 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 OR4C6Q8NH72 309 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ZCCHC14Q8WYQ9 949 aaKnown RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 EXOC2Q96KP1 924 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ZNF599Q96NL3 588 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 CSPG4P5Q96PW8 444 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 DNAJC7Q99615 494 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 WRAP53Q9BUR4 548 aaKnown RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 CINPQ9BW66 212 aaPredicted RBP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PCDH18Q9HCL0 1135 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 PCDH12Q9NPG4 1184 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 GPR27Q9NS67 375 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.98□□□□□ -1.29
SF3B3-209ENST00000567635 ETNK2Q9NVF9 386 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 UCKL1Q9NWZ5 548 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 CTTNBP2NLQ9P2B4 639 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 SEPT3Q9UH03 358 aa6.98□□□□□ -1.29
SF3B3-209ENST00000567635 LRP4O75096 1905 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-209ENST00000567635 SSU72P8A0A1W2PR75 194 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 TRABD2BA6NFA1 517 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 SRRM3A6NNA2 597 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-209ENST00000567635 H3BM21 787 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 FFAR2O15552 330 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 AKR1B10O60218 316 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 MAFKO60675 156 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 CAPNS1P04632 268 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 ALPPL2P10696 532 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 NME1P15531 152 aaKnown RBP6.97□□□□□ -1.29
SF3B3-209ENST00000567635 JUNDP17535 347 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 IL4RP24394 825 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 ACP1P24666 158 aa6.97□□□□□ -1.29
SF3B3-209ENST00000567635 HNF1BP35680 557 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms