RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 JRKLQ9Y4A0 524 aa26.37■■□□□ 1.81
NME3-209ENST00000566600 EP300Q09472 2414 aaPredicted RBP26.37■■□□□ 1.81
NME3-209ENST00000566600 ATXN2Q99700 1313 aaKnown RBP26.37■■□□□ 1.81
NME3-209ENST00000566600 UPK3BL1B0FP48 263 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 UPK3BL2E5RIL1 263 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 TRAFD1O14545 582 aaPredicted RBP26.36■■□□□ 1.81
NME3-209ENST00000566600 SERPINF2P08697 491 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 CA4P22748 312 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 NFKBIAP25963 317 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 MAOBP27338 520 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 EIF3EP60228 445 aaKnown RBP26.36■■□□□ 1.81
NME3-209ENST00000566600 RPS21P63220 83 aaKnown RBP26.36■■□□□ 1.81
NME3-209ENST00000566600 KLF1Q13351 362 aaPredicted RBP26.36■■□□□ 1.81
NME3-209ENST00000566600 SETMARQ53H47 684 aaPredicted RBP26.36■■□□□ 1.81
NME3-209ENST00000566600 TEX44Q53QW1 395 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 ERAP2Q6P179 960 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 HORMAD1Q86X24 394 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 HTR3CQ8WXA8 447 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 TLR10Q9BXR5 811 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 PCDHGC4Q9Y5F7 938 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 RALGAPA1Q6GYQ0 2036 aa26.36■■□□□ 1.81
NME3-209ENST00000566600 ZNF292O60281 2723 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 A0A1B0GTW7 788 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 A0A1W2PPC4 97 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 A0A1W2PQU0 124 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 AREL1O15033 823 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 KHNYNO15037 678 aaKnown RBP26.35■■□□□ 1.81
NME3-209ENST00000566600 HTRA2O43464 458 aaPredicted RBP26.35■■□□□ 1.81
NME3-209ENST00000566600 PTPN3P26045 913 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 PPP2CBP62714 309 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 PPP2CAP67775 309 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 DSC2Q02487 901 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 B4GALNT4Q76KP1 1039 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 CNTD1Q8N815 330 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 ARRDC2Q8TBH0 407 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 NSMCE3Q96MG7 304 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 AGAP3Q96P47 875 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 DMTF1Q9Y222 760 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 FAM186AA6NE01 2351 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 ANKRD36A6QL64 1941 aa26.35■■□□□ 1.81
NME3-209ENST00000566600 GON4LQ3T8J9 2241 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 BCAT2O15382 392 aaPredicted RBP26.34■■□□□ 1.81
NME3-209ENST00000566600 RBP3P10745 1247 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 CCDC6Q16204 474 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 ZNF569Q5MCW4 686 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 ARMC12Q5T9G4 340 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 ZCCHC9Q8N567 271 aaKnown RBP26.34■■□□□ 1.81
NME3-209ENST00000566600 PDCD6IPQ8WUM4 868 aaKnown RBP26.34■■□□□ 1.81
NME3-209ENST00000566600 TEKT5Q96M29 485 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 PARD6AQ9NPB6 346 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 TRHDEQ9UKU6 1024 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 RAI2Q9Y5P3 530 aa26.34■■□□□ 1.81
NME3-209ENST00000566600 TGM1P22735 817 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 TRAF2Q12933 501 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 TRIM61Q5EBN2 209 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 DARS2Q6PI48 645 aaKnown RBP26.33■■□□□ 1.81
NME3-209ENST00000566600 SLC23A3Q6PIS1 610 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 SLC13A5Q86YT5 568 aaPredicted RBP26.33■■□□□ 1.81
NME3-209ENST00000566600 NDUFAF2Q8N183 169 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.33■■□□□ 1.81
NME3-209ENST00000566600 C12orf50Q8NA57 414 aaPredicted RBP26.33■■□□□ 1.81
NME3-209ENST00000566600 C1orf216Q8TAB5 229 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 NUSAP1Q9BXS6 441 aaKnown RBP26.33■■□□□ 1.81
NME3-209ENST00000566600 CEP41Q9BYV8 373 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 FRMD8P1Q9BZ68 369 aaPredicted RBP26.33■■□□□ 1.81
NME3-209ENST00000566600 SLC25A51Q9H1U9 297 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 PCDH12Q9NPG4 1184 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 PYCARDQ9ULZ3 195 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 SLC6A14Q9UN76 642 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 PCDHB9Q9Y5E1 797 aa26.33■■□□□ 1.81
NME3-209ENST00000566600 STK10O94804 968 aaKnown RBP26.32■■□□□ 1.8
NME3-209ENST00000566600 PGLSO95336 258 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 CPP00450 1065 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 CFIP05156 583 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 MAT2AP31153 395 aaKnown RBP26.32■■□□□ 1.8
NME3-209ENST00000566600 AFF3P51826 1226 aaKnown RBP26.32■■□□□ 1.8
NME3-209ENST00000566600 RACK1P63244 317 aaKnown RBP26.32■■□□□ 1.8
NME3-209ENST00000566600 NIPAL4Q0D2K0 466 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 WASHC5Q12768 1159 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 SLC14A2Q15849 920 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 TMEM52BQ4KMG9 183 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 TMEM259Q4ZIN3 620 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 LRRC73Q5JTD7 316 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 ZSWIM9Q86XI8 627 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 CXorf40AQ8TE69 158 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 IMP4Q96G21 291 aaKnown RBP26.32■■□□□ 1.8
NME3-209ENST00000566600 ORAI3Q9BRQ5 295 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 GLOD4Q9HC38 313 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 KLHL8Q9P2G9 620 aaPredicted RBP26.32■■□□□ 1.8
NME3-209ENST00000566600 PHTF1Q9UMS5 762 aa26.32■■□□□ 1.8
NME3-209ENST00000566600 USP34Q70CQ2 3546 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 RIOK3O14730 519 aaKnown RBP26.31■■□□□ 1.8
NME3-209ENST00000566600 SPINT1O43278 529 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 RBL1P28749 1068 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 CD86P42081 329 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 SGCGQ13326 291 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 TEAD4Q15561 434 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 ZNF284Q2VY69 593 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 NAPEPLDQ6IQ20 393 aa26.31■■□□□ 1.8
NME3-209ENST00000566600 PRR23CQ6ZRP0 262 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms