RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 PCK1P35558 622 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 IGFALSP35858 605 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 CSNK1DP48730 415 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 HCAR3P49019 387 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 RFTN1Q14699 578 aaPredicted RBP20.37■□□□□ 0.85
CLN6-207ENST00000566347 ACAP1Q15027 740 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 UGP2Q16851 508 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 KLHL40Q2TBA0 621 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 TPRG1LQ5T0D9 272 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 AFMIDQ63HM1 303 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 ERAP2Q6P179 960 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 TRIM7Q9C029 511 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 ISCUQ9H1K1 167 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 CAAP1Q9H8G2 361 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 SP110Q9HB58 689 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 SPASTQ9UBP0 616 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 KLF15Q9UIH9 416 aa20.37■□□□□ 0.85
CLN6-207ENST00000566347 BZW2Q9Y6E2 419 aaKnown RBP20.37■□□□□ 0.85
CLN6-207ENST00000566347 A0A087WV48 116 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 TPP1O14773 563 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 MT-CO3P00414 261 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 SKILP12757 684 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 ITIH2P19823 946 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 EIF2B5Q13144 721 aaKnown RBP20.36■□□□□ 0.85
CLN6-207ENST00000566347 COL28A1Q2UY09 1125 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 MACC1Q6ZN28 852 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 CYP4V2Q6ZWL3 525 aaPredicted RBP20.36■□□□□ 0.85
CLN6-207ENST00000566347 ARHGAP12Q8IWW6 846 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 LZTR1Q8N653 840 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 TP53I13Q8NBR0 393 aaPredicted RBP20.36■□□□□ 0.85
CLN6-207ENST00000566347 LMX1AQ8TE12 382 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 HNRNPLLQ8WVV9 542 aaKnown RBP20.36■□□□□ 0.85
CLN6-207ENST00000566347 TBATAQ96M53 351 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 CINPQ9BW66 212 aaPredicted RBP20.36■□□□□ 0.85
CLN6-207ENST00000566347 ATP13A3Q9H7F0 1226 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 ZWILCHQ9H900 591 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 PCDH12Q9NPG4 1184 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 MYO1AQ9UBC5 1043 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 APOBEC3BQ9UH17 382 aaKnown RBP20.36■□□□□ 0.85
CLN6-207ENST00000566347 SALL4Q9UJQ4 1053 aa20.36■□□□□ 0.85
CLN6-207ENST00000566347 A0A1W2PQJ5 194 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 DFFAO00273 331 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 OPA1O60313 960 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 SERPINA4P29622 427 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 IL10RBQ08334 325 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 DPYSQ14117 519 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 LRRC14Q15048 493 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 TDRD12Q587J7 1177 aaKnown RBP20.35■□□□□ 0.85
CLN6-207ENST00000566347 SRLQ86TD4 932 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 TSEN2Q8NCE0 465 aaKnown RBP20.35■□□□□ 0.85
CLN6-207ENST00000566347 SYN2Q92777 582 aaPredicted RBP20.35■□□□□ 0.85
CLN6-207ENST00000566347 IL12RB2Q99665 862 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 SLC13A1Q9BZW2 595 aa20.35■□□□□ 0.85
CLN6-207ENST00000566347 MBNL1Q9NR56 388 aaKnown RBP20.35■□□□□ 0.85
CLN6-207ENST00000566347 CWC15Q9P013 229 aaKnown RBP20.35■□□□□ 0.85
CLN6-207ENST00000566347 LY6G6EA0A0G2JKS1 128 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 TMEM110-MUSTN1A8MSY1 372 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 H3BRJ5 948 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 BUB1BO60566 1050 aaPredicted RBP20.34■□□□□ 0.85
CLN6-207ENST00000566347 C6P13671 934 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 EIF4A3P38919 411 aaKnown RBP20.34■□□□□ 0.85
CLN6-207ENST00000566347 PEX5P50542 639 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 SEMG2Q02383 582 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 NSUN2Q08J23 767 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLN6-207ENST00000566347 IRF4Q15306 451 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 BOLA3Q53S33 107 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 CDCP2Q5VXM1 449 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 KDM7AQ6ZMT4 941 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 CAMK1DQ8IU85 385 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 PHACTR4Q8IZ21 702 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 NPWQ8N729 165 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 IFI44Q8TCB0 444 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 GLMNQ92990 594 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 IQCDQ96DY2 449 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 DEPDC7Q96QD5 511 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 ABCG4Q9H172 646 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 CBX8Q9HC52 389 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 ATP8A1Q9Y2Q0 1164 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 U3KQA8 63 aa20.34■□□□□ 0.85
CLN6-207ENST00000566347 LRRK1Q38SD2 2015 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 SYCE3A1L190 88 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 MMP12P39900 470 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 ARL4AP40617 200 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 RGRP47804 291 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 BLKP51451 505 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 RENBPP51606 427 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 FANCCQ00597 558 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 PPARDQ03181 441 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 PIGHQ14442 188 aaPredicted RBP20.33■□□□□ 0.85
CLN6-207ENST00000566347 AGERQ15109 404 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 DPYSL2Q16555 572 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 DEFB133Q30KQ1 61 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 PRRT3Q5FWE3 981 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 FAXCQ5TGI0 409 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 HGSNATQ68CP4 663 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 PDZD3Q86UT5 571 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 RBFAQ8N0V3 343 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 ZNF599Q96NL3 588 aa20.33■□□□□ 0.85
CLN6-207ENST00000566347 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.33■□□□□ 0.85
CLN6-207ENST00000566347 SEPT3Q9UH03 358 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms