RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SCML1Q9UN30 329 aa14.93□□□□□ -0.02
SPG7-213ENST00000566221 PCDHGC4Q9Y5F7 938 aa14.93□□□□□ -0.02
SPG7-213ENST00000566221 NUMA1Q14980 2115 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 DNALI1O14645 258 aaPredicted RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 PI15O43692 258 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 HEXIM1O94992 359 aaKnown RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 PGLSO95336 258 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 PAPSS2O95340 614 aaPredicted RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 CPP00450 1065 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 DNTTP04053 509 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 TPSB2P20231 275 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 C5AR1P21730 350 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 MAGEA6P43360 314 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 RPL26P61254 145 aaKnown RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 RPS14P62263 151 aaKnown RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 CDK16Q00536 496 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 ZBTB16Q05516 673 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 CDK18Q07002 472 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 KCNJ11Q14654 390 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 TPSAB1Q15661 275 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 KCTD19Q17RG1 926 aaPredicted RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 TTC31Q49AM3 519 aaPredicted RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 TEX35Q5T0J7 233 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 DUPD1Q68J44 220 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 NAPEPLDQ6IQ20 393 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 BRAT1Q6PJG6 821 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 PCGF5Q86SE9 256 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 LINC00523Q86TU6 105 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 TMPRSS6Q8IU80 811 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 PPIL6Q8IXY8 311 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 FBXL6Q8N531 539 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 PDCD7Q8N8D1 485 aaKnown RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 HCAR2Q8TDS4 363 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 PDCD6IPQ8WUM4 868 aaKnown RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 PRCCQ92733 491 aaPredicted RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 MRGPRX2Q96LB1 330 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 KLHL32Q96NJ5 620 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 TBL1YQ9BQ87 522 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 FICDQ9BVA6 458 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 ADGRE3Q9BY15 652 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 TRIM31Q9BZY9 425 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 DYRK4Q9NR20 520 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 POLR3BQ9NW08 1133 aaPredicted RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 SARDHQ9UL12 918 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 RPL26L1Q9UNX3 145 aaKnown RBP14.92□□□□□ -0.02
SPG7-213ENST00000566221 CEP192Q8TEP8 1941 aa14.92□□□□□ -0.02
SPG7-213ENST00000566221 ZNF106Q9H2Y7 1883 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 SMAPO00193 183 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 FZD6O60353 706 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 SUN1O94901 812 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 SEC31AO94979 1220 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 APBB3O95704 486 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 NDST3O95803 873 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 EPOP01588 193 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 GABRG2P18507 467 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 NDUFV2P19404 249 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 HLA-DPA1P20036 260 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 IVDP26440 423 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 ADRA1AP35348 466 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 RPL21P46778 160 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 CXCL12P48061 93 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 SLC7A5Q01650 507 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 SFSWAPQ12872 951 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 CALCOCO2Q13137 446 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 RNASEH2BQ5TBB1 312 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 IZUMO3Q5VZ72 239 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 KIAA1324Q6UXG2 1013 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 HOOK3Q86VS8 718 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 CACUL1Q86Y37 369 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 BBOF1Q8ND07 529 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 HMGB4Q8WW32 186 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 CPT1BQ92523 772 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 SIPA1Q96FS4 1042 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 MRGPRX1Q96LB2 322 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 HHIPQ96QV1 700 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 TRIB3Q96RU7 358 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 DPH5Q9H2P9 285 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 PABPC3Q9H361 631 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 SPATA6Q9NWH7 488 aaPredicted RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 C2orf42Q9NWW7 574 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 WHRNQ9P202 907 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 BCCIPQ9P287 314 aaKnown RBP eCLIP14.91□□□□□ -0.02
SPG7-213ENST00000566221 TPX2Q9ULW0 747 aaKnown RBP14.91□□□□□ -0.02
SPG7-213ENST00000566221 SHOC2Q9UQ13 582 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 CHKBQ9Y259 395 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 PCDHB9Q9Y5E1 797 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 TRPM6Q9BX84 2022 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 ZNF318Q5VUA4 2279 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 WDFY4Q6ZS81 3184 aa14.91□□□□□ -0.02
SPG7-213ENST00000566221 UQCRHLA0A096LP55 91 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 LOC285095A0A1B0GVY8 99 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 C16orf96A6NNT2 1141 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 MID1O15344 667 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 FGF1P05230 155 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 UQCRHP07919 91 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 ACADMP11310 421 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 NFKBIAP25963 317 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 SLC8A1P32418 973 aa14.9□□□□□ -0.02
SPG7-213ENST00000566221 GRIA4P48058 902 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms