RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 MAGEH1Q9H213 219 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 NDFIP2Q9NV92 336 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 GULP1Q9UBP9 304 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 TMEM59LQ9UK28 342 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 DGKBQ9Y6T7 804 aa12.91□□□□□ -0.34
RNF40-208ENST00000565995 USP9XQ93008 2570 aaPredicted RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 CLEC18AA5D8T8 446 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 FOXN3O00409 490 aaPredicted RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 KRIT1O00522 736 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 MMP20O60882 483 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 PPFIA2O75334 1257 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 RASGRP1O95267 797 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 RPLP0P05388 317 aaKnown RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 UGT2B4P06133 528 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 JMJD7P0C870 316 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CTSEP14091 401 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 HGFP14210 728 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 GLB1P16278 677 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 PON1P27169 355 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 ACVRL1P37023 503 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 RNASE9P60153 205 aaKnown RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 NFKB2Q00653 900 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 POLD3Q15054 466 aaPredicted RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 ALG11Q2TAA5 492 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 MANEAQ5SRI9 462 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CLEC18BQ6UXF7 455 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 GBP6Q6ZN66 633 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 XYLT1Q86Y38 959 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 JAMLQ86YT9 394 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 FAM71AQ8IYT1 594 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CLEC18CQ8NCF0 446 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 C18orf8Q96DM3 657 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 RBM15Q96T37 977 aaKnown RBP eCLIP12.9□□□□□ -0.34
RNF40-208ENST00000565995 FUCA2Q9BTY2 467 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CPEB1Q9BZB8 566 aaKnown RBP12.9□□□□□ -0.34
RNF40-208ENST00000565995 TTYH3Q9C0H2 523 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 SLC25A18Q9H1K4 315 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CLSTN2Q9H4D0 955 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 SYNCQ9H7C4 482 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 SIX2Q9NPC8 291 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 GPR34Q9UPC5 381 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 DOLKQ9UPQ8 538 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 CTNND2Q9UQB3 1225 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 LOXL2Q9Y4K0 774 aa12.9□□□□□ -0.34
RNF40-208ENST00000565995 PRAMEF33A0A0G2JMD5 474 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 C9orf172C9J069 976 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 KDELR3O43731 214 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 PRAMEF10O60809 474 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 TIMP2P16035 220 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 RHOQP17081 205 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 WT1P19544 449 aaPredicted RBP12.89□□□□□ -0.35
RNF40-208ENST00000565995 FLT3P36888 993 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 BPIFB4P59827 614 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 SRP54P61011 504 aaKnown RBP12.89□□□□□ -0.35
RNF40-208ENST00000565995 APBA1Q02410 837 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 PAK1Q13153 545 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 NFATC4Q14934 902 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 LRRC14Q15048 493 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 IRF4Q15306 451 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 INO80DQ53TQ3 878 aaPredicted RBP12.89□□□□□ -0.35
RNF40-208ENST00000565995 CERCAMQ5T4B2 595 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 DPY19L2P1Q6NXN4 242 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 CCNJLQ8IV13 435 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 HID1Q8IV36 788 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 SLITRK4Q8IW52 837 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 DRC7Q8IY82 874 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 TMEM35BQ8NCS4 154 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 OR6K2Q8NGY2 324 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 HTR3CQ8WXA8 447 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 CASKIN2Q8WXE0 1202 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 TSACCQ96A04 125 aaPredicted RBP12.89□□□□□ -0.35
RNF40-208ENST00000565995 APOOQ9BUR5 198 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 PISDQ9UG56 409 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 OR12D3Q9UGF7 316 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 AJAP1Q9UKB5 411 aaPredicted RBP12.89□□□□□ -0.35
RNF40-208ENST00000565995 HPCAL4Q9UM19 191 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 NEU3Q9UQ49 428 aa12.89□□□□□ -0.35
RNF40-208ENST00000565995 SPENQ96T58 3664 aaKnown RBP12.89□□□□□ -0.35
RNF40-208ENST00000565995 TSPAN11A1L157 253 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ZSCAN5CA6NGD5 496 aaPredicted RBP12.88□□□□□ -0.35
RNF40-208ENST00000565995 HOXC4P09017 264 aaPredicted RBP12.88□□□□□ -0.35
RNF40-208ENST00000565995 ITIH2P19823 946 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ITIH1P19827 911 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 HTR1BP28222 390 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ADRA1BP35368 520 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ETV5P41161 510 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 STX17P56962 302 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 TLE1Q04724 770 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 RAD51Q06609 339 aa12.88□□□□□ -0.35
RNF40-208ENST00000565995 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms