RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 IKZF3Q9UKT9 509 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 IDH3BO43837 385 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 ADH1AP07327 375 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 CCNYL3P0C7X3 344 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 BMP7P18075 431 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 PSEN1P49768 467 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 CAMK1DQ8IU85 385 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 RIOX2Q8IUF8 465 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SPATA6LQ8N4H0 392 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 ZNF248Q8NDW4 579 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 KCTD4Q8WVF5 259 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 ZNF354BQ96LW1 612 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 LEF1Q9UJU2 399 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 VPS4AQ9UN37 437 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC28A1O00337 649 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 ATP4AP20648 1035 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SNAP47Q5SQN1 464 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 ARHGAP36Q6ZRI8 547 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 PHF10Q8WUB8 498 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 HSFY1Q96LI6 401 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 BIRC5O15392 142 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 MSCO60682 206 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC25A3Q00325 362 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 LYPLAL1Q5VWZ2 237 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 NEK5Q6P3R8 708 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 SPESP1Q6UW49 350 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 PIWIL2Q8TC59 973 aaKnown RBP13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 GPR152Q8TDT2 470 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 DLG3Q92796 817 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 MBOAT7Q96N66 472 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 EPB41L1Q9H4G0 881 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 TMEM138Q9NPI0 162 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 ACTL7BQ9Y614 415 aa13.69□□□□□ -0.22
CX3CL1-204ENST00000565912 A0A087X0B3 334 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ADSLP30566 484 aaPredicted RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CYP4F2P78329 520 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CYP4F3Q08477 520 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 DACT2Q5SW24 774 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 AHI1Q8N157 1196 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 EPS8L1Q8TE68 723 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 QKIQ96PU8 341 aaKnown RBP eCLIP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 MCIDASD6RGH6 385 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 GCATO75600 419 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 LRATO95237 230 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 BUD31P41223 144 aaPredicted RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ARF5P84085 180 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ATP13A4Q4VNC1 1196 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 MZT2BQ6NZ67 158 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CRTC3Q6UUV7 619 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CATSPERGQ6ZRH7 1159 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 TRIM63Q969Q1 353 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 IDI2Q9BXS1 227 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ASF1AQ9Y294 204 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 AP3D1O14617 1153 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ADRB2P07550 413 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ITGA2P17301 1181 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CD52P31358 61 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 NDUFV1P49821 464 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 ST3GAL1Q11201 340 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 TOP3AQ13472 1001 aaPredicted RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 TARBP2Q15633 366 aaKnown RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 GPRIN3Q6ZVF9 776 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 FNDC11Q9BVV2 318 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 TTLL2Q9BWV7 592 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 LMAN2LQ9H0V9 348 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC27A6Q9Y2P4 619 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 QSOX1O00391 747 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 OR10H3O60404 316 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 BANF1O75531 89 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 PSMG1O95456 288 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 GOT1P17174 413 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 RPL3P39023 403 aaKnown RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 TNFSF9P41273 254 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CPSF6Q16630 551 aaKnown RBP eCLIP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 C1orf186Q6ZWK4 172 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 NAT16Q8N8M0 369 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 STK32AQ8WU08 396 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 Q96MT0 163 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 C1orf50Q9BV19 199 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC35C2Q9NQQ7 365 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 COMMD9Q9P000 198 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 GPN3Q9UHW5 284 aaPredicted RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 CYP3A4P08684 503 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 HGFP14210 728 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 RPL22P35268 128 aaKnown RBP13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 TNK2Q07912 1038 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 PSMD5Q16401 504 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 OR52K2Q8NGK3 314 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 RAD51AP1Q96B01 352 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 PGM2Q96G03 612 aa13.68□□□□□ -0.22
CX3CL1-204ENST00000565912 RNF157Q96PX1 679 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms