RNA–Protein interactions for RNA: ENST00000565351.5

KIFC3-220, Transcript of kinesin family member C3, humanhuman

TSL 1 (best)

Gene KIFC3, Length 297 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-220ENST00000565351 CHRNA4P43681 627 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 ARCN1P48444 511 aaKnown RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 MGAT5Q09328 741 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 HTR4Q13639 388 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PCSK7Q16549 785 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 GEN1Q17RS7 908 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 MYLK3Q32MK0 819 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PDPK2PQ6A1A2 396 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 KIAA0930Q6ICG6 404 aaPredicted RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 C22orf39Q6P5X5 142 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 TRMT10BQ6PF06 316 aaKnown RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 CNTN4Q8IWV2 1026 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 FRS2Q8WU20 508 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 MZB1Q8WU39 189 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 CDKL2Q92772 493 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 NXPE3Q969Y0 559 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 ECHDC3Q96DC8 303 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 CERS2Q96G23 380 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 ZNF641Q96N77 438 aaPredicted RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PAFAH2Q99487 392 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 GAS2L1Q99501 681 aaPredicted RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 MCMBPQ9BTE3 642 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 TRMT61BQ9BVS5 477 aaKnown RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 EBF3Q9H4W6 596 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 SMYD2Q9NRG4 433 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PIH1D1Q9NWS0 290 aaKnown RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 USP15Q9Y4E8 981 aaPredicted RBP12.33□□□□□ -0.44
KIFC3-220ENST00000565351 PRUNE2Q8WUY3 3088 aa12.33□□□□□ -0.44
KIFC3-220ENST00000565351 COL4A3Q01955 1670 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SOX1O00570 391 aaPredicted RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 PGLSO95336 258 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 GBP2P32456 591 aaPredicted RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 GJA4P35212 333 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 OPRD1P41143 372 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 GRIA4P48058 902 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SERPINB9P50453 376 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SLC18A1P54219 525 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ILF2Q12905 390 aaKnown RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 TRAF2Q12933 501 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 DNAJC3Q13217 504 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 DLG2Q15700 870 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 PTPRNQ16849 979 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 CARD16Q5EG05 197 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 TSTD2Q5T7W7 516 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 GALNT7Q86SF2 657 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 C12orf40Q86WS4 652 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SUGP1Q8IWZ8 645 aaKnown RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 LMNTD2Q8IXW0 634 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 YAF2Q8IY57 180 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 NAT16Q8N8M0 369 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 HCAR2Q8TDS4 363 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SCG3Q8WXD2 468 aaKnown RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 MFSD3Q96ES6 412 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 LRIG1Q96JA1 1093 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ZFYVE19Q96K21 471 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 EXOC2Q96KP1 924 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ZNF778Q96MU6 729 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 TRIM56Q9BRZ2 755 aaKnown RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 TRABDQ9H4I3 376 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 MAGEE1Q9HCI5 957 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SSU72Q9NP77 194 aaKnown RBP12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ELOVL2Q9NXB9 296 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 NSMCE4AQ9NXX6 385 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 HACD3Q9P035 362 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 SLCO3A1Q9UIG8 710 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 PCDHGC4Q9Y5F7 938 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 ANKRD36A6QL64 1941 aa12.32□□□□□ -0.44
KIFC3-220ENST00000565351 CXorf49A8MYA2 514 aaPredicted RBP12.31□□□□□ -0.44
KIFC3-220ENST00000565351 POC1B-GALNT4F8VUJ3 575 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 TRIM24O15164 1050 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 SLC7A4O43246 635 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 CRTAMO95727 393 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 PDHA1P08559 390 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 PAMP19021 973 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 NMBRP28336 390 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 NNMTP40261 264 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 SLCO1A2P46721 670 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 STK19P49842 368 aaPredicted RBP12.31□□□□□ -0.44
KIFC3-220ENST00000565351 PDE1BQ01064 536 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 BCL2L1Q07817 233 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 SMAD4Q13485 552 aaKnown RBP12.31□□□□□ -0.44
KIFC3-220ENST00000565351 POU6F1Q14863 301 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 E2F5Q15329 346 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 ITPRIPL2Q3MIP1 535 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 ATXN7L2Q5T6C5 722 aaPredicted RBP12.31□□□□□ -0.44
KIFC3-220ENST00000565351 TEDDM1Q5T9Z0 273 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 LGSNQ5TDP6 509 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 KDM7AQ6ZMT4 941 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 TIFABQ6ZNK6 161 aa12.31□□□□□ -0.44
KIFC3-220ENST00000565351 CAPN12Q6ZSI9 719 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms