RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 UVRAGQ9P2Y5 699 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 INTUQ9ULD6 942 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 ARID1BQ8NFD5 2236 aaPredicted RBP13.78□□□□□ -0.2
VPS9D1-204ENST00000565023 FAM149AA5PLN7 773 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 FPGTO14772 594 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 PROS1P07225 676 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 IGF2RP11717 2491 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 RXRGP48443 463 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 SLC25A11Q02978 314 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 IL10RBQ08334 325 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 DPYSL2Q16555 572 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 ATP13A4Q4VNC1 1196 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 DHRS13Q6UX07 377 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 POLNQ7Z5Q5 900 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 SRLQ86TD4 932 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 GATA6Q92908 595 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 CSPG4P5Q96PW8 444 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 SUV39H2Q9H5I1 410 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 UCKL1Q9NWZ5 548 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 FLNBO75369 2602 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-204ENST00000565023 NBEAQ8NFP9 2946 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 SOWAHDA6NJG2 315 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 AREL1O15033 823 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 MUSKO15146 869 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 TM7SF2O76062 418 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 MTA2O94776 668 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 MAP3K6O95382 1288 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 CD48P09326 243 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 CYLC1P35663 651 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 HCAR3P49019 387 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 SCNN1BP51168 640 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 ZNF135P52742 658 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 SLC10A7Q0GE19 358 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 PDE1CQ14123 709 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 ZNF235Q14590 738 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 LBRQ14739 615 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 TCEAL1Q15170 157 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 HADHQ16836 314 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 AFMIDQ63HM1 303 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 KYAT3Q6YP21 454 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 ABI3BPQ7Z7G0 1075 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 TMEM139Q8IV31 216 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 ZCCHC14Q8WYQ9 949 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 BAG1Q99933 345 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 C1QTNF2Q9BXJ5 285 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 TMEM121BQ9BXQ6 578 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 CPEB1Q9BZB8 566 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 GRPEL1Q9HAV7 217 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 PCDH12Q9NPG4 1184 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 LCMT1Q9UIC8 334 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 HS3ST3A1Q9Y663 406 aa13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 EPN1Q9Y6I3 576 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 COL5A1P20908 1838 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-204ENST00000565023 A8MX80 341 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 NDUFA10O95299 355 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 MYF5P13349 255 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 DGKAP23743 735 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 SERPINA4P29622 427 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 IGFALSP35858 605 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 MAGEA1P43355 309 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 THOP1P52888 689 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 TAS2R40P59535 323 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 MAXP61244 160 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 DAB2P98082 770 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 BCL2L1Q07817 233 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 MESDQ14696 234 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 SPA17Q15506 151 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 TCEA2Q15560 299 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 HS1BP3Q53T59 392 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 TPRG1LQ5T0D9 272 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 TMCO4Q5TGY1 634 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 KANSL1Q7Z3B3 1105 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 ZSWIM9Q86XI8 627 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 SLC25A45Q8N413 288 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 ATPAF2Q8N5M1 289 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 LZTR1Q8N653 840 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 SLC35G2Q8TBE7 412 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 PDCD6IPQ8WUM4 868 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 TEKT4Q8WW24 435 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 RFFLQ8WZ73 363 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 MBNL1Q9NR56 388 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 SEPT3Q9UH03 358 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 ZMIZ1Q9ULJ6 1067 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 PCDHA13Q9Y5I0 950 aa13.75□□□□□ -0.21
VPS9D1-204ENST00000565023 DSPP15924 2871 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 LOC400499M0QZD8 3231 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 GCN1Q92616 2671 aaKnown RBP13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 GOLGA6L3A6NEY3 463 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 GOLGA6L6A8MZA4 724 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 TRIM38O00635 465 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 SIGLEC6O43699 453 aa13.74□□□□□ -0.21
VPS9D1-204ENST00000565023 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms