RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 RTKNQ9BST9 563 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 FICDQ9BVA6 458 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 FSD1LQ9BXM9 530 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 CEP44Q9C0F1 390 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 TSPYL1Q9H0U9 437 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 TNKS2Q9H2K2 1166 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 XAB2Q9HCS7 855 aaKnown RBP11.21□□□□□ -0.61
SF3B3-205ENST00000564899 VPS45Q9NRW7 570 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 ELOVL2Q9NXB9 296 aa11.21□□□□□ -0.61
SF3B3-205ENST00000564899 SHROOM3Q8TF72 1996 aa11.21□□□□□ -0.62
SF3B3-205ENST00000564899 NBEAQ8NFP9 2946 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 TIMM44O43615 452 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 ATP9BO43861 1147 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 USP12O75317 370 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PPFIA2O75334 1257 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 GSRP00390 522 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SERPINF2P08697 491 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 CTHP32929 405 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 GRIA1P42261 906 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 MAPK8P45983 427 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 VASPP50552 380 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 AP1S1P61966 158 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SNRPD1P62314 119 aaKnown RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PFKPQ01813 784 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PRKCQQ04759 706 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 DHX9Q08211 1270 aaKnown RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 MTM1Q13496 603 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 OLIG2Q13516 323 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PCSK7Q16549 785 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PTPRNQ16849 979 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 BBS9Q3SYG4 887 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 ACCSLQ4AC99 568 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 FNDC3BQ53EP0 1204 aaKnown RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 DNAJC21Q5F1R6 531 aaKnown RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 RALGPS1Q5JS13 557 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 DGKKQ5KSL6 1271 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 FNBP1LQ5T0N5 605 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 LRRC8BQ6P9F7 803 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 NUDT18Q6ZVK8 323 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 TMC3Q7Z5M5 1100 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SRLQ86TD4 932 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 LINC00523Q86TU6 105 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SFTPA1Q8IWL2 248 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 RYBPQ8N488 228 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 OR2AP1Q8NGE2 309 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 UCMAQ8WVF2 138 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 ISG20Q96AZ6 181 aaKnown RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 TADA1Q96BN2 335 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SHDQ96IW2 340 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 MRGPRX2Q96LB1 330 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 APOL2Q9BQE5 337 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PHACTR1Q9C0D0 580 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 C8orf33Q9H7E9 229 aaPredicted RBP11.2□□□□□ -0.62
SF3B3-205ENST00000564899 NOD2Q9HC29 1040 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 ARFGAP3Q9NP61 516 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SAYSD1Q9NPB0 183 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SLCO3A1Q9UIG8 710 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PLA2G4CQ9UP65 541 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 SLC8A2Q9UPR5 921 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 PIAS3Q9Y6X2 628 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 LAMA5O15230 3695 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 MYOFQ9NZM1 2061 aa11.2□□□□□ -0.62
SF3B3-205ENST00000564899 DSPP15924 2871 aaKnown RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 TTC34A8MYJ7 566 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 PRR5-ARHGAP8B1AHC4 643 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 E7ESA3 106 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 EIF3HO15372 352 aaKnown RBP eCLIP11.19□□□□□ -0.624e-6■□□□□ 11
SF3B3-205ENST00000564899 BNIP3LO60238 219 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 ZNF821O75541 412 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 MLNP12872 115 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 KCNA4P22459 653 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 CA4P22748 312 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 ADRA1AP35348 466 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 RECQLP46063 649 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 CSNK1DP48730 415 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 GALK1P51570 392 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 SESN2P58004 480 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 ARHGAP8P85298 464 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 PDIA2Q13087 525 aaKnown RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 GAS6Q14393 721 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 IHHQ14623 411 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 SLMAPQ14BN4 828 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 CARD16Q5EG05 197 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 BEND6Q5SZJ8 279 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 NCEH1Q6PIU2 408 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 TXNDC11Q6PKC3 985 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 Q6ZVU0 165 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 KDELC2Q7Z4H8 507 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 CAND1Q86VP6 1230 aaKnown RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 RALGPS2Q86X27 583 aaPredicted RBP11.19□□□□□ -0.62
SF3B3-205ENST00000564899 DNAAF3Q8N9W5 541 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 OR52K1Q8NGK4 314 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 OR6K2Q8NGY2 324 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 IFT43Q96FT9 208 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 MSANTD3Q96H12 275 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 MYO19Q96H55 970 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 OSBPL6Q9BZF3 934 aa11.19□□□□□ -0.62
SF3B3-205ENST00000564899 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms