RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 RNF139Q8WU17 664 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SEPT8Q92599 483 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 C19orf43Q9BQ61 176 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RMND5AQ9H871 391 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SP140LQ9H930 580 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ADGRE2Q9UHX3 823 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 VPS4AQ9UN37 437 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PCDHB2Q9Y5E7 798 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ACTL7BQ9Y614 415 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 BIRC5O15392 142 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 APOA1P02647 267 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ATF2P15336 505 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ITIH2P19823 946 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ADRA1DP25100 572 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TKTL1P51854 596 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CTBP1Q13363 440 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ZNF789Q5FWF6 425 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 INTS11Q5TA45 600 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 C16orf62Q7Z3J2 963 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 POU5F2Q8N7G0 328 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM156AQ8NDB6 213 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SAMD11Q96NU1 681 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 VRK1Q99986 396 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 TTYH1Q9H313 450 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 SMARCAD1Q9H4L7 1026 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PCMTD2Q9NV79 361 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PRELID1Q9Y255 219 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 LOC100653049A0A140TA62 436 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 IQCF5A8MTL0 148 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TMEM114B3SHH9 223 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TMEM233B4DJY2 109 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 KRT34O76011 436 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GSTM2P28161 218 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CDKN1CP49918 316 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 RAP1GDS1P52306 607 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PTENP60484 403 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PTPN11Q06124 597 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 POU6F1Q14863 301 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MUM1Q2TAK8 710 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 CCDC149Q6ZUS6 474 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MCUQ8NE86 351 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 OR10T2Q8NGX3 314 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ZNF473Q8WTR7 871 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 DCAKDQ8WVC6 231 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 AP3S1Q92572 193 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MSANTD3Q96H12 275 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NIFKQ9BYG3 293 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 CYP4F11Q9HBI6 524 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NINJ2Q9NZG7 142 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 VSTM5A8MXK1 200 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ATG7O95352 703 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 AGTP01019 485 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TMEM253P0C7T8 217 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RBP3P10745 1247 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NEK2P51955 445 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ARL4CP56559 192 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RUNX1T1Q06455 604 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MTX3Q5HYI7 312 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 C6orf52Q5T4I8 152 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TMEM110Q86TL2 294 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PIGZQ86VD9 579 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 MYLK4Q86YV6 388 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 RHOT1Q8IXI2 618 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 C2orf73Q8N5S3 287 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 FRMD1Q8N878 549 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 EXD1Q8NHP7 514 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ENKURQ8TC29 256 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GANCQ8TET4 914 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NAF1Q96HR8 494 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM111AQ96PZ2 611 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PANX3Q96QZ0 392 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 PHOX2BQ99453 314 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GMPR2Q9P2T1 348 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 AAR2Q9Y312 384 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 A0A0D9SEW6 157 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NEMP2A6NFY4 417 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 DNAJB5O75953 348 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ANXA6P08133 673 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 BGNP21810 368 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RTP1P59025 263 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 YBX1P67809 324 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 CDC16Q13042 620 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 GALNT3Q14435 633 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 INPP5AQ14642 412 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TTC31Q49AM3 519 aaPredicted RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 SNAP47Q5SQN1 464 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 TRPM8Q7Z2W7 1104 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SLFN11Q7Z7L1 901 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 C2orf15Q8WU43 125 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM162AQ96A26 154 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 NMD3Q96D46 503 aaKnown RBP3.38□□□□□ -1.87
CHD9-213ENST00000564845 CHMP6Q96FZ7 201 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SERAC1Q96JX3 654 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 RBBP8Q99708 897 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ULBP1Q9BZM6 244 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FANCEQ9HB96 536 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 SNX7Q9UNH6 387 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ATP11BQ9Y2G3 1177 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 ATP6AP2A0A1C7CYW4 349 aa3.38□□□□□ -1.87
CHD9-213ENST00000564845 FAM47E-STBD1D6RA91 191 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms