RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TBCELQ5QJ74 424 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 PARP8Q8N3A8 854 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CPSF7Q8N684 471 aaKnown RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 SLC4A11Q8NBS3 891 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CAPSLQ8WWF8 208 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 RTP4Q96DX8 246 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CEP44Q9C0F1 390 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 XYLT2Q9H1B5 865 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 VTA1Q9NP79 307 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 LTB4R2Q9NPC1 389 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 ASNSD1Q9NWL6 643 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CACNA2D2Q9NY47 1150 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 SEPT10Q9P0V9 454 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 TIMM22Q9Y584 194 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 ANKRD12Q6UB98 2062 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 SYNJ2BP-COX16A0A087WUM0 186 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 BCLAF3A2AJT9 711 aaKnown RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 EIF3FO00303 357 aaPredicted RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 XYLBO75191 536 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 TADA2AO75478 443 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 MICAL2O94851 1124 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 HOXC6P09630 235 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CYP3A5P20815 502 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 S100A1P23297 94 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 TAPT1Q6NXT6 567 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 ZNF420Q8TAQ5 688 aaPredicted RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 FNIP1Q8TF40 1166 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 FEM1CQ96JP0 617 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 ACE2Q9BYF1 805 aaPredicted RBP16.41■□□□□ 0.22
LINC00554-201ENST00000564841 OXSMQ9NWU1 459 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 COX16Q9P0S2 106 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 ARID2Q68CP9 1835 aa16.41■□□□□ 0.22
LINC00554-201ENST00000564841 TRIM24O15164 1050 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 MAN1A2O60476 641 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SNAP29O95721 258 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 MAGEA6P43360 314 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 AQP6Q13520 282 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 MXD4Q14582 209 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 REP15Q6BDI9 236 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 FAM35AQ86V20 835 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 TTC30AQ86WT1 665 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SCYL1Q96KG9 808 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SNRNP25Q9BV90 132 aaKnown RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SETD4Q9NVD3 440 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 TUBA8Q9NY65 449 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SUCOQ9UBS9 1254 aaKnown RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SLC39A10Q9ULF5 831 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 MRPL42Q9Y6G3 142 aaKnown RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 H3BRB1 525 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 KPNA4O00629 521 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 HBP1O60381 514 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SNAI1O95863 264 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 GP5P40197 560 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 ADAM17P78536 824 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 INSCQ1MX18 579 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SLC36A3Q495N2 470 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 DHFR2Q86XF0 187 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SCUBE3Q8IX30 993 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 MAGEE2Q8TD90 523 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 USP33Q8TEY7 942 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 LHPPQ9H008 270 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 TNFRSF12AQ9NP84 129 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 SIX4Q9UIU6 781 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 PCDHGA3Q9Y5H0 932 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 LAMA2P24043 3122 aaKnown RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 NOL3O60936 208 aaKnown RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 GMNNO75496 209 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 S100BP04271 92 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 EFNA5P52803 228 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 LRP8Q14114 963 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 CMTR2Q8IYT2 770 aaKnown RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 UNC93B1Q9H1C4 597 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 CCDC68Q9H2F9 335 aa16.4■□□□□ 0.22
LINC00554-201ENST00000564841 IFT80Q9P2H3 777 aaPredicted RBP16.4■□□□□ 0.22
LINC00554-201ENST00000564841 HTTP42858 3142 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ATP6AP2A0A1C7CYW4 349 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 NEMP2A6NFY4 417 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 SYNCRIPO60506 623 aaKnown RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ATP6AP2O75787 350 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 CYP2B6P20813 491 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 GPD1P21695 349 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 CYP2F1P24903 491 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 GNL1P36915 607 aaPredicted RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF143P52747 638 aaPredicted RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 IFITM2Q01629 132 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 CLPPQ16740 277 aaPredicted RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF667Q5HYK9 610 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 STEAP4Q687X5 459 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ERMP1Q7Z2K6 904 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 WDR49Q8IV35 697 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ANKFN1Q8N957 763 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 URGCPQ8TCY9 931 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ZFP90Q8TF47 636 aa16.39■□□□□ 0.21
LINC00554-201ENST00000564841 PTCD2Q8WV60 388 aaKnown RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 ZNF669Q96BR6 464 aaPredicted RBP16.39■□□□□ 0.21
LINC00554-201ENST00000564841 CERS2Q96G23 380 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms