RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 C12orf50Q8NA57 414 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-208ENST00000564703 SKA1Q96BD8 255 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 TLR10Q9BXR5 811 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 NUSAP1Q9BXS6 441 aaKnown RBP16.12■□□□□ 0.17
RAB40C-208ENST00000564703 SEMA4GQ9NTN9 838 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 KLHL8Q9P2G9 620 aaPredicted RBP16.12■□□□□ 0.17
RAB40C-208ENST00000564703 TRHDEQ9UKU6 1024 aa16.12■□□□□ 0.17
RAB40C-208ENST00000564703 ZFHX2Q9C0A1 2572 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 A0A1B0GTW7 788 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 A0A1W2PPC4 97 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 A0A1W2PQU0 124 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 UPK3BL1B0FP48 263 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 UPK3BL2E5RIL1 263 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 ENC1O14682 589 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 BCAT2O15382 392 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 GJB3O75712 270 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CFIP05156 583 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 ZNF806P0C7X5 589 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 PTPN3P26045 913 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 RBL1P28749 1068 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 TNNT3P45378 269 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 EPHB1P54762 984 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 ZBTB17Q13105 803 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 TEAD4Q15561 434 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CCDC6Q16204 474 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CSRP2Q16527 193 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 SETMARQ53H47 684 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 KIAA1161Q6NSJ0 714 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CCDC70Q6NSX1 233 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 SLC13A5Q86YT5 568 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 SLC35F6Q8N357 371 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CNTD1Q8N815 330 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CXorf40AQ8TE69 158 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 PBKQ96KB5 322 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 TEKT5Q96M29 485 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 QKIQ96PU8 341 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 FAM118BQ9BPY3 351 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 HERPUD2Q9BSE4 406 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 CEP41Q9BYV8 373 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 FRMD8P1Q9BZ68 369 aaPredicted RBP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 TMEM74BQ9NUR3 256 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 PYCARDQ9ULZ3 195 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 PHTF1Q9UMS5 762 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 DMTF1Q9Y222 760 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 PCDHB9Q9Y5E1 797 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 RAI2Q9Y5P3 530 aa16.11■□□□□ 0.17
RAB40C-208ENST00000564703 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB40C-208ENST00000564703 PTPRZ1P23471 2315 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-208ENST00000564703 TSPAN11A1L157 253 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 TRAFD1O14545 582 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-208ENST00000564703 HTRA2O43464 458 aaPredicted RBP16.1■□□□□ 0.17
RAB40C-208ENST00000564703 CPP00450 1065 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 IGHV4-34P06331 123 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 CXCR5P32302 372 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 CD86P42081 329 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 ABL2P42684 1182 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 STAT4Q14765 748 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 TRIM61Q5EBN2 209 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 PLA2G2CQ5R387 149 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 ALG1LQ6GMV1 187 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 ADAT2Q7Z6V5 191 aaKnown RBP16.1■□□□□ 0.17
RAB40C-208ENST00000564703 ARRDC2Q8TBH0 407 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 ECHDC3Q96DC8 303 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 SERAC1Q96JX3 654 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 SLC17A9Q9BYT1 436 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 SLC25A51Q9H1U9 297 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 GLOD4Q9HC38 313 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 PCDH12Q9NPG4 1184 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 AASDHPPTQ9NRN7 309 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 SLC6A14Q9UN76 642 aa16.1■□□□□ 0.17
RAB40C-208ENST00000564703 ATXN2Q99700 1313 aaKnown RBP16.1■□□□□ 0.17
RAB40C-208ENST00000564703 PRAMEF26H0Y7S4 382 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 RIOK3O14730 519 aaKnown RBP16.09■□□□□ 0.17
RAB40C-208ENST00000564703 AREL1O15033 823 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 SLC31A1O15431 190 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 KCNN4O15554 427 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 LATO43561 262 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 PGLSO95336 258 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 SYPP08247 313 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 STIP1P31948 543 aaKnown RBP16.09■□□□□ 0.17
RAB40C-208ENST00000564703 GNG11P61952 73 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 PPP2CBP62714 309 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 PPP2CAP67775 309 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 NIPAL4Q0D2K0 466 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 WASHC5Q12768 1159 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 KLF1Q13351 362 aaPredicted RBP16.09■□□□□ 0.17
RAB40C-208ENST00000564703 LONRF2Q1L5Z9 754 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 LRRC73Q5JTD7 316 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 ITPRIPL1Q6GPH6 555 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 ZCCHC9Q8N567 271 aaKnown RBP16.09■□□□□ 0.17
RAB40C-208ENST00000564703 KLK6Q92876 244 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 VOPP1Q96AW1 172 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 C1QTNF7Q9BXJ2 289 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 ADGRE3Q9BY15 652 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 C10orf88Q9H8K7 445 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 CHKBQ9Y259 395 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 ANKRD36A6QL64 1941 aa16.09■□□□□ 0.17
RAB40C-208ENST00000564703 RIF1Q5UIP0 2472 aaKnown RBP16.09■□□□□ 0.17
RAB40C-208ENST00000564703 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms