RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 KLF15Q9UIH9 416 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 GGT7Q9UJ14 662 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 AP4E1Q9UPM8 1137 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 SCINQ9Y6U3 715 aa12.31□□□□□ -0.44
GTF3C1-204ENST00000564664 LY6G6EA0A0G2JKS1 128 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 EME2A4GXA9 379 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 LRRC53A6NM62 1247 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 PRPSAP2O60256 369 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 TCEA3O75764 348 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 PALMO75781 387 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 DXOO77932 396 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 ANXA6P08133 673 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 HTR1BP28222 390 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 PCK1P35558 622 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 LSSP48449 732 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 RENBPP51606 427 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 OGDHQ02218 1023 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 PPARDQ03181 441 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 LRRC14Q15048 493 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 ELOCQ15369 112 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 NR0B2Q15466 257 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 ASIC2Q16515 512 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 KLHL40Q2TBA0 621 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 TBC1D25Q3MII6 688 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 ANO6Q4KMQ2 910 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 BOLA3Q53S33 107 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 FIGNQ5HY92 759 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 CFAP58Q5T655 872 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 FAXCQ5TGI0 409 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 RFX8Q6ZV50 586 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 FSTL5Q8N475 847 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 TP53I13Q8NBR0 393 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 IFI44Q8TCB0 444 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 MAPK15Q8TD08 544 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 LMX1AQ8TE12 382 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 NAT6Q93015 286 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 BOCQ9BWV1 1114 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 DHX35Q9H5Z1 703 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 HAUS4Q9H6D7 363 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 ATP13A3Q9H7F0 1226 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 APOBEC3BQ9UH17 382 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 ITM2BQ9Y287 266 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 BZW2Q9Y6E2 419 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 U3KQA8 63 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 CELSR3Q9NYQ7 3312 aa12.3□□□□□ -0.44
GTF3C1-204ENST00000564664 A0A1B0GTH6 734 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 A0A1W2PQ67 120 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 TMCO5BA8MYB1 307 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 J3KR12 359 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 INSIG1O15503 277 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 TLX3O43711 291 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 BRINP1O60477 761 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 NEBLO76041 1014 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 HOXC4P09017 264 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ALPIP09923 528 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 SERPINA4P29622 427 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 MIPP30301 263 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 IGFALSP35858 605 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ADKP55263 362 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 CLDN6P56747 220 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ERVPABLB-1P60509 514 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 IL10RBQ08334 325 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 KLHL30Q0D2K2 578 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 SOWAHCQ53LP3 525 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 PRRT3Q5FWE3 981 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 C6orf132Q5T0Z8 1188 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ESRP1Q6NXG1 681 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 IGF2-ASQ6U949 168 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 KDM7AQ6ZMT4 941 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ZNF571Q7Z3V5 609 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 SRLQ86TD4 932 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 PHACTR4Q8IZ21 702 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 LSM14AQ8ND56 463 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ZNF599Q96NL3 588 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 DCBLD2Q96PD2 775 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 ZWILCHQ9H900 591 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 PCDH12Q9NPG4 1184 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 MBNL1Q9NR56 388 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 KCTD5Q9NXV2 234 aa12.29□□□□□ -0.44
GTF3C1-204ENST00000564664 FASNP49327 2511 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 CPED1A4D0V7 1026 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 TK2O00142 265 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 YY2O15391 372 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 BUB1BO60566 1050 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 GCATO75600 419 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ERCC2P18074 760 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 NFKBIAP25963 317 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 HSPA9P38646 679 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ZNF165P49910 485 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 LIG3P49916 1009 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 HK3P52790 923 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 BCL2L1Q07817 233 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 NR1I3Q14994 352 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 ISXQ2M1V0 245 aa12.28□□□□□ -0.44
GTF3C1-204ENST00000564664 WSCD2Q2TBF2 565 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms