RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 IL17FQ96PD4 163 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 ZNF385AQ96PM9 386 aaKnown RBP4.45□□□□□ -1.7
CHD9-212ENST00000564641 PKP4Q99569 1192 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 MSTO1Q9BUK6 570 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 CLK4Q9HAZ1 481 aaKnown RBP4.45□□□□□ -1.7
CHD9-212ENST00000564641 G6PC2Q9NQR9 355 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 CAMSAP1Q5T5Y3 1602 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 SYCP2Q9BX26 1530 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 STRCQ7RTU9 1775 aa4.45□□□□□ -1.7
CHD9-212ENST00000564641 ZNF142P52746 1687 aaPredicted RBP4.45□□□□□ -1.7
CHD9-212ENST00000564641 TARSL2A2RTX5 802 aaKnown RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 E7EVH7 732 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 H0Y3Z8 333 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 IFRD1O00458 451 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 CBX6O95503 412 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 CH25HO95992 272 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 TCEA1P23193 301 aaKnown RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 DEKP35659 375 aaKnown RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 MTNR1AP48039 350 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 RBM5P52756 815 aaKnown RBP eCLIP4.44□□□□□ -1.7
CHD9-212ENST00000564641 HILS1P60008 231 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 ARHGAP8P85298 464 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 DLG1Q12959 904 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 PDCLQ13371 301 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 BYSLQ13895 437 aaKnown RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 KRTAP24-1Q3LI83 254 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 LRRC24Q50LG9 513 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 PLEKHO1Q53GL0 409 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 XKR9Q5GH70 373 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 SULT6B1Q6IMI4 303 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 SYNE3Q6ZMZ3 975 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 ANKRD44Q8N8A2 993 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 LMNTD1Q8N9Z9 388 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 ZNF114Q8NC26 417 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 MCPH1Q8NEM0 835 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 ATOH1Q92858 354 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 MTBPQ96DY7 904 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 KTI12Q96EK9 354 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 WBP1Q96G27 269 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 LTV1Q96GA3 475 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 MPHOSPH6Q99547 160 aaKnown RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 EPYCQ99645 322 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 MVB12BQ9H7P6 319 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 PLEKHA2Q9HB19 425 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 ATP8A2Q9NTI2 1148 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 CPS1P31327 1500 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 GPATCH8Q9UKJ3 1502 aaKnown RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 SCN5AQ14524 2016 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 PTPRKQ15262 1439 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 CEP162Q5TB80 1403 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 SPATA31D1Q6ZQQ2 1576 aa4.44□□□□□ -1.7
CHD9-212ENST00000564641 INO80Q9ULG1 1556 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 CEP170BQ9Y4F5 1589 aaPredicted RBP4.44□□□□□ -1.7
CHD9-212ENST00000564641 A2ML1A8K2U0 1454 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 CCDC141Q6ZP82 1450 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 NLRP1Q9C000 1473 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 DHX29Q7Z478 1369 aaKnown RBP4.43□□□□□ -1.7
CHD9-212ENST00000564641 KDM5DQ9BY66 1539 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 HMX3A6NHT5 357 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 VNN2O95498 520 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 LDHAP00338 332 aaKnown RBP4.43□□□□□ -1.7
CHD9-212ENST00000564641 SP1P08047 785 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 ANOS1P23352 680 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 CST5P28325 142 aaPredicted RBP4.43□□□□□ -1.7
CHD9-212ENST00000564641 CENPAP49450 140 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 TROAPQ12815 778 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 IL13RA2Q14627 380 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 CCDC6Q16204 474 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 RPE65Q16518 533 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 CALCRLQ16602 461 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 RETSATQ6NUM9 610 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 RRAGAQ7L523 313 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 SYT13Q7L8C5 426 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 MYLK4Q86YV6 388 aaPredicted RBP4.43□□□□□ -1.7
CHD9-212ENST00000564641 DENND6AQ8IWF6 608 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 AADATQ8N5Z0 425 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 GPT2Q8TD30 523 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 TRIB2Q92519 343 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 SDCCAG3Q96C92 435 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 RNF183Q96D59 192 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 LRFN5Q96NI6 719 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 NODALQ96S42 347 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 TAF1DQ9H5J8 278 aaPredicted RBP4.43□□□□□ -1.7
CHD9-212ENST00000564641 WDR6Q9NNW5 1121 aaKnown RBP4.43□□□□□ -1.7
CHD9-212ENST00000564641 DONSONQ9NYP3 566 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 PLXNC1O60486 1568 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 MYO3AQ8NEV4 1616 aa4.43□□□□□ -1.7
CHD9-212ENST00000564641 CLTCQ00610 1675 aaKnown RBP4.42□□□□□ -1.7
CHD9-212ENST00000564641 ZC3H13Q5T200 1668 aaKnown RBP4.42□□□□□ -1.7
CHD9-212ENST00000564641 ABHD14A-ACY1A0A1B0GW23 586 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 C17orf100A8MU93 164 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 CLGNO14967 610 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 CREB3O43889 395 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 POLR1AO95602 1720 aaPredicted RBP4.42□□□□□ -1.7
CHD9-212ENST00000564641 CSTBP04080 98 aaKnown RBP4.42□□□□□ -1.7
CHD9-212ENST00000564641 IGHV4-30-4P0DP06 118 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 AMD1P17707 334 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 CYP4A11Q02928 519 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 BLMHQ13867 455 aa4.42□□□□□ -1.7
CHD9-212ENST00000564641 LPIN1Q14693 890 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms