RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 GOLGA8CPA6NN73 597 aa31.02■■■□□ 2.56
CMTM4-204ENST00000563952 FPGTO14772 594 aa31.02■■■□□ 2.56
CMTM4-204ENST00000563952 HYAL3O43820 417 aaPredicted RBP31.02■■■□□ 2.56
CMTM4-204ENST00000563952 MTA2O94776 668 aa31.02■■■□□ 2.56
CMTM4-204ENST00000563952 KYAT3Q6YP21 454 aaKnown RBP31.02■■■□□ 2.56
CMTM4-204ENST00000563952 BBS5Q8N3I7 341 aa31.02■■■□□ 2.56
CMTM4-204ENST00000563952 FAM174AQ8TBP5 190 aa31.02■■■□□ 2.56
CMTM4-204ENST00000563952 ASB12Q8WXK4 309 aa31.02■■■□□ 2.56
CMTM4-204ENST00000563952 LENG8Q96PV6 779 aaPredicted RBP31.02■■■□□ 2.56
CMTM4-204ENST00000563952 KLF6Q99612 283 aaPredicted RBP31.02■■■□□ 2.56
CMTM4-204ENST00000563952 APOBEC2Q9Y235 224 aaKnown RBP31.02■■■□□ 2.56
CMTM4-204ENST00000563952 SDC3O75056 442 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 TM7SF2O76062 418 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 MAP3K6O95382 1288 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 PRKCGP05129 697 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 AP1S1P61966 158 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 SEMG2Q02383 582 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 PAFAH1B3Q15102 231 aaKnown RBP31.01■■■□□ 2.55
CMTM4-204ENST00000563952 ERAP2Q6P179 960 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 SLC22A18ASQ8N1D0 253 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 PGBD5Q8N414 524 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 RAPGEF5Q92565 580 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 SCNM1Q9BWG6 230 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 FTSJ1Q9UET6 329 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 WASF3Q9UPY6 502 aa31.01■■■□□ 2.55
CMTM4-204ENST00000563952 TRIM16O95361 564 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 ATXN1LP0C7T5 689 aaKnown RBP31■■■□□ 2.55
CMTM4-204ENST00000563952 KDELR1P24390 212 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 HSPA9P38646 679 aaKnown RBP31■■■□□ 2.55
CMTM4-204ENST00000563952 MAGEA1P43355 309 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 MMP13P45452 471 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 TMEM52BQ4KMG9 183 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 MARC1Q5VT66 337 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 KDM7AQ6ZMT4 941 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 SLCO6A1Q86UG4 719 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 CHCHD4Q8N4Q1 142 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 EID2Q8N6I1 236 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 SCUBE2Q9NQ36 999 aa31■■■□□ 2.55
CMTM4-204ENST00000563952 LRRD1A4D1F6 860 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 GALNT2Q10471 571 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 LRRC49Q8IUZ0 686 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 DENND6BQ8NEG7 585 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 FAF2Q96CS3 445 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 NSMCE3Q96MG7 304 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 ANP32EQ9BTT0 268 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 C1QTNF7Q9BXJ2 289 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 ATP8A1Q9Y2Q0 1164 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 COQ6Q9Y2Z9 468 aa30.99■■■□□ 2.55
CMTM4-204ENST00000563952 RIOK3O14730 519 aaKnown RBP30.98■■■□□ 2.55
CMTM4-204ENST00000563952 TNFSF14O43557 240 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 TNNT1P13805 278 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 GARSP41250 739 aaKnown RBP30.98■■■□□ 2.55
CMTM4-204ENST00000563952 RABIFP47224 123 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 MAXP61244 160 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 DCP2Q8IU60 420 aaKnown RBP30.98■■■□□ 2.55
CMTM4-204ENST00000563952 PQLC3Q8N755 202 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 CENPTQ96BT3 561 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 ECHDC3Q96DC8 303 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 NUDCD1Q96RS6 583 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 HYOU1Q9Y4L1 999 aa30.98■■■□□ 2.55
CMTM4-204ENST00000563952 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP30.97■■■□□ 2.55
CMTM4-204ENST00000563952 MMP12P39900 470 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 NOP2P46087 812 aaKnown RBP30.97■■■□□ 2.55
CMTM4-204ENST00000563952 SPA17Q15506 151 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 CCDC157Q569K6 752 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 ZNF542PQ5EBM4 170 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 CCDC170Q8IYT3 715 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 MGME1Q9BQP7 344 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 NOD2Q9HC29 1040 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 NT5MQ9NPB1 228 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 DNAJC28Q9NX36 388 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 TOR4AQ9NXH8 423 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 LRRK1Q38SD2 2015 aa30.97■■■□□ 2.55
CMTM4-204ENST00000563952 TRAFD1O14545 582 aaPredicted RBP30.96■■■□□ 2.55
CMTM4-204ENST00000563952 KRT1P04264 644 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 C6P13671 934 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 CR2P20023 1033 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 IGFALSP35858 605 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 LIG3P49916 1009 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 GBE1Q04446 702 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 PDE1CQ14123 709 aaPredicted RBP30.96■■■□□ 2.55
CMTM4-204ENST00000563952 TCEAL1Q15170 157 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 KANSL1Q7Z3B3 1105 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 RAB44Q7Z6P3 723 aaPredicted RBP30.96■■■□□ 2.55
CMTM4-204ENST00000563952 PDCD6IPQ8WUM4 868 aaKnown RBP30.96■■■□□ 2.55
CMTM4-204ENST00000563952 LRRN4Q8WUT4 740 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 CNDP2Q96KP4 475 aaKnown RBP30.96■■■□□ 2.55
CMTM4-204ENST00000563952 RNF157Q96PX1 679 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 PANX2Q96RD6 677 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 CAAP1Q9H8G2 361 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 GPR27Q9NS67 375 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 KLK13Q9UKR3 277 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 PCDHGC4Q9Y5F7 938 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 PCDHA13Q9Y5I0 950 aa30.96■■■□□ 2.55
CMTM4-204ENST00000563952 LCA5LO95447 670 aa30.95■■■□□ 2.55
CMTM4-204ENST00000563952 LDOC1O95751 146 aaPredicted RBP30.95■■■□□ 2.55
CMTM4-204ENST00000563952 CYLC1P35663 651 aaPredicted RBP30.95■■■□□ 2.55
CMTM4-204ENST00000563952 SLC1A1P43005 524 aa30.95■■■□□ 2.55
CMTM4-204ENST00000563952 POLR2LP62875 67 aaKnown RBP30.95■■■□□ 2.55
CMTM4-204ENST00000563952 ITKQ08881 620 aa30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms