RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 SCAMP1O15126 338 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 AQP9O43315 295 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 BUB1BO60566 1050 aaPredicted RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 SERPING1P05155 500 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 C6P13671 934 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 IL1R2P27930 398 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 SERPINA4P29622 427 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 ARL4AP40617 200 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 SSR1P43307 286 aaKnown RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 INSM1Q01101 510 aaPredicted RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 EIF2B5Q13144 721 aaKnown RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 PTK2BQ14289 1009 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 TCEA2Q15560 299 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 UGP2Q16851 508 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 HGSNATQ68CP4 663 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 SRLQ86TD4 932 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 PSTKQ8IV42 348 aaKnown RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 TP53INP2Q8IXH6 220 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 TP53I13Q8NBR0 393 aaPredicted RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 HNRNPLLQ8WVV9 542 aaKnown RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 CENPTQ96BT3 561 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 DCBLD2Q96PD2 775 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 DUSP23Q9BVJ7 150 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 TCEAL2Q9H3H9 227 aaPredicted RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 ATP13A3Q9H7F0 1226 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 IFNKQ9P0W0 207 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 ANAPC7Q9UJX3 599 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 CLCA2Q9UQC9 943 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 BZW2Q9Y6E2 419 aaKnown RBP17.84■□□□□ 0.45
NME3-205ENST00000563854 PKD1L2Q7Z442 2459 aa17.84■□□□□ 0.45
NME3-205ENST00000563854 CACNA1GO43497 2377 aa17.83■□□□□ 0.45
NME3-205ENST00000563854 LZTS3O60299 673 aaPredicted RBP17.83■□□□□ 0.44
NME3-205ENST00000563854 CKMT1AP12532 417 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 PCK1P35558 622 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 PBX1P40424 430 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 SUOXP51687 545 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 ZBED6P86452 979 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 BCL2L1Q07817 233 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 IL10RBQ08334 325 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 C1orf61Q13536 156 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 DPYSQ14117 519 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 TMEM52BQ4KMG9 183 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 FAXCQ5TGI0 409 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 AFMIDQ63HM1 303 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 BRAT1Q6PJG6 821 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 ZSWIM9Q86XI8 627 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 PHACTR4Q8IZ21 702 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 ZNF641Q96N77 438 aaPredicted RBP17.83■□□□□ 0.44
NME3-205ENST00000563854 TUBGCP5Q96RT8 1024 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 NUP85Q9BW27 656 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 EVA1BQ9NVM1 165 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 DKK4Q9UBT3 224 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 ATP8A1Q9Y2Q0 1164 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 GPSM3Q9Y4H4 160 aa17.83■□□□□ 0.44
NME3-205ENST00000563854 ARID1BQ8NFD5 2236 aaPredicted RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 TSPAN11A1L157 253 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 PCCBP05166 539 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 AMPD1P23109 780 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 GJC1P36383 396 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 EIF4A3P38919 411 aaKnown RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 LIG3P49916 1009 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 SCNN1BP51168 640 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 ZNF135P52742 658 aaPredicted RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 E2F1Q01094 437 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 PIGHQ14442 188 aaPredicted RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 ZNF235Q14590 738 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 LBRQ14739 615 aaKnown RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 LRRC14Q15048 493 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 CDKN3Q16667 212 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 COL28A1Q2UY09 1125 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 PRRT3Q5FWE3 981 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 ZCCHC8Q6NZY4 707 aaKnown RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 TMCO3Q6UWJ1 677 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 MACC1Q6ZN28 852 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 BTN2A2Q8WVV5 523 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 SYN2Q92777 582 aaPredicted RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 IL12RB2Q99665 862 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 SLC13A1Q9BZW2 595 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 ETNK2Q9NVF9 386 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 SPASTQ9UBP0 616 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 CAPN11Q9UMQ6 739 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 LUC7L2Q9Y383 392 aaKnown RBP17.82■□□□□ 0.44
NME3-205ENST00000563854 FAM208BQ5VWN6 2430 aa17.82■□□□□ 0.44
NME3-205ENST00000563854 A0A087X0T9 212 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 TTC24A2A3L6 582 aaPredicted RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 CPED1A4D0V7 1026 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 RIOK3O14730 519 aaKnown RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 MUSKO15146 869 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 MT-CO3P00414 261 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 GYPCP04921 128 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 FAM228BP0C875 321 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 RARAP10276 462 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 MMP12P39900 470 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 HCAR3P49019 387 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 DUSP3P51452 185 aaPredicted RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 YPEL5P62699 121 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 KRT81Q14533 505 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 RFTN1Q14699 578 aaPredicted RBP17.81■□□□□ 0.44
NME3-205ENST00000563854 ACAP1Q15027 740 aa17.81■□□□□ 0.44
NME3-205ENST00000563854 DPYSL2Q16555 572 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms