RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 HOXD9P28356 352 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 SSR1P43307 286 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 CDH6P55285 790 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 RPS24P62847 133 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 MESP2Q0VG99 397 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 MTA1Q13330 715 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TDGQ13569 410 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 RUNX3Q13761 415 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 DPYSQ14117 519 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 DPYSL3Q14195 570 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 GRAMD1BQ3KR37 738 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ARL13BQ3SXY8 428 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ALFQ53S48 1182 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ZNF569Q5MCW4 686 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 MPP7Q5T2T1 576 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 DCAF12L1Q5VU92 463 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 AADACL2Q6P093 401 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 MFSD7Q6UXD7 560 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TPGS1Q6ZTW0 290 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 PEX26Q7Z412 305 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 NLRP14Q86W24 1093 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 SPACA3Q8IXA5 215 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 YAF2Q8IY57 180 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 KATNAL2Q8IYT4 538 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 SYCE1Q8N0S2 351 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 CFAP52Q8N1V2 620 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TRIM58Q8NG06 486 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 OR52K2Q8NGK3 314 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 WFDC5Q8TCV5 224 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 JPH3Q8WXH2 748 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 DNASE1L2Q92874 299 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ATP2A3Q93084 1043 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 FAF2Q96CS3 445 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TBC1D31Q96DN5 1066 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TRIM44Q96DX7 344 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 LMLNQ96KR4 655 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 RPRD1AQ96P16 312 aaPredicted RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 CSPG4P5Q96PW8 444 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ALS2CR12Q96Q35 445 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 WDR24Q96S15 920 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 HERPUD2Q9BSE4 406 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TRMT61BQ9BVS5 477 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 SLC13A1Q9BZW2 595 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 KLC2Q9H0B6 622 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 EBF3Q9H4W6 596 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 IFT22Q9H7X7 185 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 BRD9Q9H8M2 597 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ECT2Q9H8V3 914 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TRPV5Q9NQA5 729 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 SLC2A4RGQ9NR83 387 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 ETNK2Q9NVF9 386 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 THG1LQ9NWX6 298 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 MPP6Q9NZW5 540 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 CWC15Q9P013 229 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 PPARGC1AQ9UBK2 798 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 OR12D3Q9UGF7 316 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 SUSD2Q9UGT4 822 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TAGLN3Q9UI15 199 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 FBXO10Q9UK96 956 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 TRHDEQ9UKU6 1024 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 CLEC4EQ9ULY5 219 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 DUSP12Q9UNI6 340 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 APOBEC2Q9Y235 224 aaKnown RBP5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 MFHAS1Q9Y4C4 1052 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 DENND4CQ5VZ89 1909 aa5.33□□□□□ -1.56
HERPUD1-207ENST00000563781 COL4A2P08572 1712 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 hCG_1818297A0A087WSY0 165 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 A0A1B0GVM2 712 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 LRRD1A4D1F6 860 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 TCAF2A6NFQ2 919 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 MIF4GDA9UHW6 222 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 F5H5T6 163 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 EEF2KO00418 725 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 TRIM24O15164 1050 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 KIF5CO60282 957 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 CACNG3O60359 315 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 TBL1XO60907 577 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 SRGAP2O75044 1071 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 LUC7L3O95232 432 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 ATP1A1P05023 1023 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 CISD3P0C7P0 127 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 PYGMP11217 842 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 SRFP11831 508 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 PABPC1P11940 636 aaKnown RBP5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 TYRP14679 529 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 ERCC2P18074 760 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 KDELR1P24390 212 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 EPHB2P29323 1055 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 HTR7P34969 479 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 GJA4P35212 333 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 PTPN7P35236 360 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 CHKAP35790 457 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 OPRD1P41143 372 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 CDKN2BP42772 138 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 KIR3DL1P43629 444 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 HCAR3P49019 387 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 DNA2P51530 1060 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 ZNF135P52742 658 aaPredicted RBP5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 RWDD2BP57060 319 aa5.32□□□□□ -1.56
HERPUD1-207ENST00000563781 TPI1P60174 286 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms