RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 RNASE9P60153 205 aaKnown RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 ADCY2Q08462 1091 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PDCLQ13371 301 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 GPM6BQ13491 265 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PIGHQ14442 188 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 MESDQ14696 234 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 HADHQ16836 314 aaKnown RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 C21orf62-AS1Q17RA5 79 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 MGAT5BQ3V5L5 792 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 C9orf50Q5SZB4 431 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 FAM102AQ5T9C2 384 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 CYP4A22Q5TCH4 519 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PLEKHA7Q6IQ23 1121 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 SLC8B1Q6J4K2 584 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PMF1Q6P1K2 205 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PRSS55Q6UWB4 352 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 SYT10Q6XYQ8 523 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 MMS22LQ6ZRQ5 1243 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CLEC20AQ6ZU45 233 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PAQR9Q6ZVX9 377 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PEX26Q7Z412 305 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PHLDB2Q86SQ0 1253 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 LRRTM3Q86VH5 581 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 TTC30AQ86WT1 665 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 XYLT1Q86Y38 959 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 DNAAF5Q86Y56 855 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 PALB2Q86YC2 1186 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 LDLRAD3Q86YD5 345 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 NUP93Q8N1F7 819 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 SLC35F6Q8N357 371 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 UBL4BQ8N7F7 174 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 C3orf20Q8ND61 904 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 OR10T2Q8NGX3 314 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ZNF461Q8TAF7 563 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 POF1BQ8WVV4 589 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 IRGQQ8WZA9 623 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 NINJ1Q92982 152 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ARL8AQ96BM9 186 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 MCRS1Q96EZ8 462 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 C8orf48Q96LL4 319 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CEP295NLQ96MC4 621 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CPXM1Q96SM3 734 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 KCNK16Q96T55 309 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 NAPGQ99747 312 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 GDF15Q99988 308 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 RTP3Q9BQQ7 232 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ZSWIM1Q9BR11 485 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 TRIM62Q9BVG3 475 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 FBXO44Q9H4M3 255 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 SLC28A3Q9HAS3 691 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 DMAP1Q9NPF5 467 aaPredicted RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 CNGB3Q9NQW8 809 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ENTPD7Q9NQZ7 604 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 TMEM51Q9NW97 253 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ASNSD1Q9NWL6 643 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 HSFX1Q9UBD0 423 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 MTRRQ9UBK8 725 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 TRIM10Q9UDY6 481 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 AFF4Q9UHB7 1163 aaKnown RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 DNAI1Q9UI46 699 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 MAGEL2Q9UJ55 1249 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ANAPC7Q9UJX3 599 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 TFR2Q9UP52 801 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDR2-203ENST00000563573 ALG6Q9Y672 507 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 CHD9Q3L8U1 2897 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ZNF638Q14966 1978 aaKnown RBP4.8□□□□□ -1.64
CDR2-203ENST00000563573 GREB1Q4ZG55 1949 aa4.8□□□□□ -1.64
CDR2-203ENST00000563573 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 FAM170AA1A519 330 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MTMR11A4FU01 709 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 TMEM110-MUSTN1A8MSY1 372 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 GRXCR1A8MXD5 290 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MIF4GDA9UHW6 222 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 C5orf67F2Z3F1 127 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 F8VP50 259 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 H0YGN5 161 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 H3BNC9 293 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 TULP2O00295 520 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 DVL2O14641 736 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PRRG1O14668 218 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 MTSS1O43312 755 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 SPOPO43791 374 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 BEST1O76090 585 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 URI1O94763 535 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 TOX4O94842 621 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PROSCO94903 275 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ABLIM3O94929 683 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 FSBPO95073 299 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 ZBED1O96006 694 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 C1RP00736 705 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 F9P00740 461 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 OR4Q2P0C623 313 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PDGFRAP16234 1089 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 PRLRP16471 622 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RPL17P18621 184 aaKnown RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 GPD1P21695 349 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 SDC4P31431 198 aa4.79□□□□□ -1.64
CDR2-203ENST00000563573 RFC1P35251 1148 aaPredicted RBP4.79□□□□□ -1.64
CDR2-203ENST00000563573 PAFAH1B1P43034 410 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms