RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 CLDN14O95500 239 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 CHRM4P08173 479 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 WEE2P0C1S8 567 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 DGKAP23743 735 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 RYKP34925 604 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 HDAC4P56524 1084 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 BRWD1-AS2P59051 145 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 ESCO2Q56NI9 601 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 STPG1Q5TH74 334 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 UNQ6126/PRO20091Q6UXV3 157 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 MOB3CQ70IA8 216 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 TUBA1AQ71U36 451 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 SUGP1Q8IWZ8 645 aaKnown RBP3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 FTSJ3Q8IY81 847 aaKnown RBP3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 SAMD3Q8N6K7 520 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF441Q8N8Z8 693 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 RAB40AQ8WXH6 277 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 ERGIC1Q969X5 290 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF385AQ96PM9 386 aaKnown RBP3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 TUBA1CQ9BQE3 449 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 EVA1AQ9H8M9 152 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 RASSF1Q9NS23 344 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 SLCO3A1Q9UIG8 710 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 PCDHAC2Q9Y5I4 1007 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 SNX9Q9Y5X1 595 aa3.38□□□□□ -1.87
HMGB1P33-201ENST00000563485 IGHV4OR15-8A0A075B7B6 117 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 FAM90A7PA6NKC0 464 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 HSPB2A8KAH6 182 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 FAM90A22PA8MWA6 464 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 FAM90A12PA8MX19 464 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 FAM90A23PA8MXZ1 464 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 PEX12O00623 359 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 NTN3O00634 580 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 PER2O15055 1255 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZIC3O60481 467 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 GAGE7O76087 117 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 LINC00271P0C7V0 271 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 GAGE12FP0CL80 117 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 GAGE12GP0CL81 117 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 GAGE12IP0CL82 117 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 NLRP5P59047 1200 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 GAGE1Q13065 139 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 GAGE4Q13068 117 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 RUNX2Q13950 521 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 TAF5Q15542 800 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 HSPB2Q16082 182 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 SOWAHAQ2M3V2 549 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 EDRF1Q3B7T1 1238 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZC3HC1Q86WB0 502 aaKnown RBP3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 CPXM2Q8N436 756 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 PARP16Q8N5Y8 322 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 LMNTD1Q8N9Z9 388 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 SPPL3Q8TCT6 385 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 CNOT9Q92600 299 aaKnown RBP3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 CD101Q93033 1021 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 EPYCQ99645 322 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 MMTAG2Q9BU76 263 aaKnown RBP3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 MROH8Q9H579 483 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 EPHX3Q9H6B9 360 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 UBTD1Q9HAC8 227 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 SMARCAL1Q9NZC9 954 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 SUFUQ9UMX1 484 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 PCDHGB5Q9Y5G0 923 aa3.37□□□□□ -1.87
HMGB1P33-201ENST00000563485 A0A0U1RQF3 1178 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 C17orf113A0A1B0GUU1 675 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 hCG_1642624A0A1W2PR95 340 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 ARHGAP10A1A4S6 786 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 VWA3AA6NCI4 1184 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 PABPN1LA6NDY0 278 aaKnown RBP3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 KLRF2D3W0D1 207 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 WNT9BO14905 357 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 KLK10O43240 276 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 HILS1P60008 231 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF155Q12901 538 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZBTB17Q13105 803 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 RBM39Q14498 530 aaKnown RBP3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 KRT72Q14CN4 511 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 ARHGEF6Q15052 776 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 EFNB3Q15768 340 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 PDCD2Q16342 344 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 MRGPRG-AS1Q2M3A8 158 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 ADCK5Q3MIX3 580 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 PAPPA-AS1Q5QFB9 102 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 C17orf99Q6UX52 265 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 HERC6Q8IVU3 1022 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 DCUN1D3Q8IWE4 304 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 GJC3Q8NFK1 279 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 CREB3L4Q8TEY5 395 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 SH3KBP1Q96B97 665 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 C3orf30Q96M34 536 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 COG8Q96MW5 612 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 EBF2Q9HAK2 575 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 LRRC4Q9HBW1 653 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 ZNF224Q9NZL3 707 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 CDC14AQ9UNH5 594 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 A3GALT2U3KPV4 340 aa3.36□□□□□ -1.87
HMGB1P33-201ENST00000563485 SH2D7A6NKC9 451 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 NDUFS7O75251 213 aa3.35□□□□□ -1.87
HMGB1P33-201ENST00000563485 CNPP09543 421 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms