RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 A0A087WUV0 522 aaPredicted RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 WASH3PC4AMC7 463 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PGAM1P18669 254 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 MAPK8P45983 427 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 BCL2L1Q07817 233 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 ZNF844Q08AG5 666 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 ZNF234Q14588 700 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 PREPLQ4J6C6 727 aaPredicted RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 CES3Q6UWW8 571 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 CCNJLQ8IV13 435 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 KDM1BQ8NB78 822 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 FBF1Q8TES7 1133 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PDCD6IPQ8WUM4 868 aaKnown RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 EZH1Q92800 747 aaPredicted RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 DNASE1L2Q92874 299 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 FCRL3Q96P31 734 aaPredicted RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 SMIM14Q96QK8 99 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 KIFC1Q9BW19 673 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 CPEB1Q9BZB8 566 aaKnown RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 ZDHHC6Q9H6R6 413 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 CHRAC1Q9NRG0 131 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 HEBP1Q9NRV9 189 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 THAP10Q9P2Z0 257 aaPredicted RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PLXNB3Q9ULL4 1909 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 MAGEB16A2A368 324 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 LOC730098B7Z3J9 87 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 K7EQS6 105 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 HTRA2O43464 458 aaPredicted RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 PGLSO95336 258 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 POP4O95707 220 aaKnown RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 PRKCGP05129 697 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 GSTA2P09210 222 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 HLA-EP13747 358 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 ADRA1DP25100 572 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 NMBRP28336 390 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 SLC8A1P32418 973 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 CTHP32929 405 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PHBP35232 272 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 FNDC3BQ53EP0 1204 aaKnown RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 EMC10Q5UCC4 262 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 TMEM135Q86UB9 458 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 LPCAT1Q8NF37 534 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 GSDMBQ8TAX9 411 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PIH1D2Q8WWB5 315 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 RMDN1Q96DB5 314 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 ZNF778Q96MU6 729 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 TUBGCP5Q96RT8 1024 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 RANBP9Q96S59 729 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 NAT9Q9BTE0 207 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 TMEM245Q9H330 911 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 ATP13A3Q9H7F0 1226 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 MRM3Q9HC36 420 aaKnown RBP10.24□□□□□ -0.77
SMG1-208ENST00000563448 ZDHHC4Q9NPG8 344 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 SAMD15Q9P1V8 674 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PRKAG3Q9UGI9 489 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 SLC8A2Q9UPR5 921 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 STARD13Q9Y3M8 1113 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 PCDHB9Q9Y5E1 797 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 SPO11Q9Y5K1 396 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 WASF2Q9Y6W5 498 aa10.24□□□□□ -0.77
SMG1-208ENST00000563448 FAM237BA0A1B0GVD1 139 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 TCRBV9S1A1TA0A576 114 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 CCDC78A2IDD5 438 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ANKRD66B4E2M5 251 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SOCS5O75159 536 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SPAG6O75602 509 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 USP1O94782 785 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 C1QAP02745 245 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 CTSLP07711 333 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 PIRTP0C851 137 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ALADP13716 330 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 CA4P22748 312 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SERPINA4P29622 427 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 IL12RB1P42701 662 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 TNFRSF4P43489 277 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 EIF3BP55884 814 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 RAD51Q06609 339 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 CRYMQ14894 314 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 PTPRRQ15256 657 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 QPCTQ16769 361 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ANKRD20A4Q4UJ75 823 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SPANXN3Q5MJ09 141 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 CEP85LQ5SZL2 805 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ARMC12Q5T9G4 340 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 EGFLAMQ63HQ2 1017 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 PKN3Q6P5Z2 889 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 TRMT10BQ6PF06 316 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 RALGPS2Q86X27 583 aaPredicted RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 ZSWIM9Q86XI8 627 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 SUGP1Q8IWZ8 645 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 UNC5BQ8IZJ1 945 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 PPHLN1Q8NEY8 458 aaKnown RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 MAFAQ8NHW3 353 aaPredicted RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 ZNF669Q96BR6 464 aaPredicted RBP10.23□□□□□ -0.77
SMG1-208ENST00000563448 MFSD3Q96ES6 412 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 ACOX2Q99424 681 aa10.23□□□□□ -0.77
SMG1-208ENST00000563448 HEPHQ9BQS7 1158 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms