RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 CCDC110Q8TBZ0 833 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 NEK9Q8TD19 979 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PWWP2AQ96N64 755 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MLPHQ9BV36 600 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SLC46A2Q9BY10 475 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 TRIM31Q9BZY9 425 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CLPBQ9H078 707 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CRLF2Q9HC73 371 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 NMRK1Q9NWW6 199 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 GPRC5DQ9NZD1 345 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 DBR1Q9UK59 544 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 BTBD3Q9Y2F9 522 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 WDR37Q9Y2I8 494 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 RNF114Q9Y508 228 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CDY1Q9Y6F8 540 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 XDHP47989 1333 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PXDNLA1KZ92 1463 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 QSER1Q2KHR3 1735 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SHANK3Q9BYB0 1731 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KDM3BQ7LBC6 1761 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 UBR2Q8IWV8 1755 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 RTL9Q8NET4 1388 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 UTYO14607 1347 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MYO3BQ8WXR4 1341 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 QSOX1O00391 747 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KIAA0391O15091 583 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MAGEB3O15480 346 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SRGAP3O43295 1099 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SEC31AO94979 1220 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 LETM1O95202 739 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 EPN2O95208 641 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 DIRAS3O95661 229 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KLKB1P03952 638 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CSF1RP07333 972 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZFYP08048 801 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CD8BP10966 210 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 NCF1P14598 390 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CASTP20810 708 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ADSSP30520 456 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 STIP1P31948 543 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CSF2RBP32927 897 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PDE1AP54750 535 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ADAM17P78536 824 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ARF5P84085 180 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CD83Q01151 205 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 GOLGA8DPQ0D2H9 430 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ABHD18Q0P651 414 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 IKZF1Q13422 519 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 KRT24Q2M2I5 525 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PTCHD3Q3KNS1 767 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZNF792Q3KQV3 632 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 GLE1Q53GS7 698 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ZNF667Q5HYK9 610 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 ETFRF1Q6IPR1 90 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SARM1Q6SZW1 724 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CBLL1Q75N03 491 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 GPRIN1Q7Z2K8 1008 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SLCO6A1Q86UG4 719 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 GAS2L3Q86XJ1 694 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SPACA3Q8IXA5 215 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MINDY1Q8N5J2 469 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PTGR2Q8N8N7 351 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 BANPQ8N9N5 519 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CCDC148Q8NFR7 591 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CADM4Q8NFZ8 388 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 URGCPQ8TCY9 931 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CASKIN2Q8WXE0 1202 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SEC14L1Q92503 715 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SMARCE1Q969G3 411 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PTERQ96BW5 349 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 HHIPL1Q96JK4 782 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SPATA13Q96N96 652 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CD180Q99467 661 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 FAM83DQ9H4H8 585 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 GPR35Q9HC97 309 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 UTP6Q9NYH9 597 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 TMOD2Q9NZR1 351 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 MPP6Q9NZW5 540 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 RAB21Q9UL25 225 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 PLAGL2Q9UPG8 496 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 DRG1Q9Y295 367 aaKnown RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 CAB39Q9Y376 341 aaPredicted RBP5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 U3KQE9 123 aa5.33□□□□□ -1.56
VPS35P1-201ENST00000563400 SIPA1L3O60292 1781 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 RREB1Q92766 1687 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 PAPPAQ13219 1627 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 MAST3O60307 1309 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 A0A0G2JLW4 131 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 GOLGA6L10A0A0M3HER8 536 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 M0QX08 132 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 PAPSS1O43252 624 aaPredicted RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 PRDM1O75626 825 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 C1SP09871 688 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 LYL1P12980 280 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 HGFP14210 728 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 DPEP1P16444 411 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 KRT4P19013 534 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 TRIM21P19474 475 aaKnown RBP5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 IDUAP35475 653 aa5.32□□□□□ -1.56
VPS35P1-201ENST00000563400 CCR3P51677 355 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms