RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 MAPK11Q15759 364 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TMEM198Q66K66 360 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TIFABQ6ZNK6 161 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PLEKHG7Q6ZR37 379 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 RFX6Q8HWS3 928 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM20CQ8IXL6 584 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TDRD5Q8NAT2 981 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CXorf38Q8TB03 319 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 LPGAT1Q92604 370 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 MED30Q96HR3 178 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 HEXIM2Q96MH2 286 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 EFHD1Q9BUP0 239 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SNTG2Q9NY99 539 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 FLRT1Q9NZU1 646 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TMEM216Q9P0N5 145 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 ZNF229Q9UJW7 825 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC15A5A6NIM6 579 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM159BA6NKW6 160 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CHADO15335 359 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PRKCGP05129 697 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TNFAIP2Q03169 654 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 RALGDSQ12967 914 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TMEM132DQ14C87 1099 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 UGT3A1Q6NUS8 523 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 ABRAXAS1Q6UWZ7 409 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CAND1Q86VP6 1230 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 C2orf69Q8N8R5 385 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 ANKFN1Q8N957 763 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 RAB2BQ8WUD1 216 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TUBA1CQ9BQE3 449 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 LPIN3Q9BQK8 851 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 FRMD8P1Q9BZ68 369 aaPredicted RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 WDR12Q9GZL7 423 aaKnown RBP14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 ABHD16BQ9H3Z7 469 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 QPCTLQ9NXS2 382 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 TXNDC16Q9P2K2 825 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 MORF4L1Q9UBU8 362 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 PCSK1NQ9UHG2 260 aa14.14□□□□□ -0.15
GTF3C1-203ENST00000562609 CITO14578 2027 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 TCRBV5S1A1TA0A578 114 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 TOR1BO14657 336 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 NRP1O14786 923 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 HCRTO43612 131 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 GRAP2O75791 330 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 CRYZL1O95825 349 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 CALB1P05937 261 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 ARL1P40616 181 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 RAB6CQ53S08 254 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 PPM1JQ5JR12 505 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 UBE2UQ5VVX9 321 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 GET4Q7L5D6 327 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC22A16Q86VW1 577 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 GOLM1Q8NBJ4 401 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 FAM110BQ8TC76 370 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 SNX19Q92543 992 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 EGLN2Q96KS0 407 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 TCF12Q99081 682 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 BEGAINQ9BUH8 593 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 RAB6CQ9H0N0 254 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 ATP13A3Q9H7F0 1226 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 M0QYV0 167 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 TNPO2O14787 897 aaKnown RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 APRTP07741 180 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 ABCB1P08183 1280 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 KRT3P12035 628 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 PRKACBP22694 351 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 EEF1B2P24534 225 aaKnown RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 AKAP5P24588 427 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 SERPINB1P30740 379 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 IST1P53990 364 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 PHC1P78364 1004 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 BEX3Q00994 111 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 PTPN11Q06124 597 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 LRIT3Q3SXY7 679 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 BTBD8Q5XKL5 378 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 NAPRTQ6XQN6 538 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 CAMK1DQ8IU85 385 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 UNC5BQ8IZJ1 945 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC38A6Q8IZM9 456 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 TNS4Q8IZW8 715 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 MFSD2AQ8NA29 543 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 SLC43A3Q8NBI5 491 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 CNDP2Q96KP4 475 aaKnown RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 UHRF1Q96T88 793 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 IL12RB2Q99665 862 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 NFKBIZQ9BYH8 718 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 GPN2Q9H9Y4 310 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 NEK6Q9HC98 313 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 ZNF358Q9NW07 568 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 DPP3Q9NY33 737 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 CRNNQ9UBG3 495 aaPredicted RBP14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 DCDC2Q9UHG0 476 aa14.13□□□□□ -0.15
GTF3C1-203ENST00000562609 CYP2B6P20813 491 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PSMA2P25787 234 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 NDST1P52848 882 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 PSME3P61289 254 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 COPZ1P61923 177 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 ROR1Q01973 937 aa14.12□□□□□ -0.15
GTF3C1-203ENST00000562609 SPCS2Q15005 226 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms