RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 DCAF4L2Q8NA75 395 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 NUDCD1Q96RS6 583 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 DCDC2Q9UHG0 476 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 KCTD3Q9Y597 815 aa16.69■□□□□ 0.26
PKD1-225ENST00000562297 RHOP08100 348 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 CES1P23141 567 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 HADHAP40939 763 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 ARSDP51689 593 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 TEAD2Q15562 447 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 UGP2Q16851 508 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 C9orf50Q5SZB4 431 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 RNF187Q5TA31 235 aaPredicted RBP16.68■□□□□ 0.26
PKD1-225ENST00000562297 N4BP2L1Q5TBK1 243 aaPredicted RBP16.68■□□□□ 0.26
PKD1-225ENST00000562297 FYB2Q5VWT5 728 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 ZNF470Q6ECI4 717 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 NEPROQ6NW34 567 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 NLRP9Q7RTR0 991 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 MFSD6LQ8IWD5 586 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 APCDD1Q8J025 514 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 OTUD6BQ8N6M0 293 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 CCDC63Q8NA47 563 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 SH3RF2Q8TEC5 729 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 DDI1Q8WTU0 396 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 CCT6BQ92526 530 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 FAM167BQ9BTA0 163 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
PKD1-225ENST00000562297 PLK2Q9NYY3 685 aa16.68■□□□□ 0.26
PKD1-225ENST00000562297 BIRC5O15392 142 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 PLIN3O60664 434 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 FGF19O95750 216 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 MT-CO1P00395 513 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 BPGMP07738 259 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKD1-225ENST00000562297 NSUN2Q08J23 767 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKD1-225ENST00000562297 THOC5Q13769 683 aaKnown RBP16.67■□□□□ 0.26
PKD1-225ENST00000562297 MPPE1Q53F39 396 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 C16orf46Q6P387 395 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 KIAA0408Q6ZU52 694 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 PLD6Q8N2A8 252 aaKnown RBP16.67■□□□□ 0.26
PKD1-225ENST00000562297 MICALL1Q8N3F8 863 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 BRSK1Q8TDC3 778 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 PEX13Q92968 403 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 SCUBE2Q9NQ36 999 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 FBXO5Q9UKT4 447 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 CHKBQ9Y259 395 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 ARL2BPQ9Y2Y0 163 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 ARIH1Q9Y4X5 557 aaPredicted RBP16.67■□□□□ 0.26
PKD1-225ENST00000562297 E2F8A0AVK6 867 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 AURKAO14965 403 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 SLC7A4O43246 635 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 IL1BP01584 269 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 PROCP04070 461 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 MPOP05164 745 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 C2P06681 752 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 CA3P07451 260 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 BLOC1S5Q8TDH9 187 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 PPM1EQ8WY54 764 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
PKD1-225ENST00000562297 LMLNQ96KR4 655 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 LBHD1Q9BQE6 289 aaPredicted RBP16.67■□□□□ 0.26
PKD1-225ENST00000562297 TASP1Q9H6P5 420 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 ZNF358Q9NW07 568 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
PKD1-225ENST00000562297 TMEM216Q9P0N5 145 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 ARL5AQ9Y689 179 aa16.67■□□□□ 0.26
PKD1-225ENST00000562297 A0A096LPK6 155 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 CCT8L1PA6NM43 557 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 CCL22O00626 93 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 PDHA1P08559 390 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 HNRNPA1P09651 372 aaKnown RBP eCLIP16.66■□□□□ 0.26
PKD1-225ENST00000562297 PIRTP0C851 137 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 IRF9Q00978 393 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 LMAN2Q12907 356 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 SPRED3Q2MJR0 410 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 PRSS36Q5K4E3 855 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 NCEH1Q6PIU2 408 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 TPGS1Q6ZTW0 290 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 FIBINQ8TAL6 211 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 HDAC10Q969S8 669 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 TSSK1BQ9BXA7 367 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 MFSD1Q9H3U5 465 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 SLC39A10Q9ULF5 831 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 RIMKLBQ9ULI2 386 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 PCDHGC4Q9Y5F7 938 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 SPO11Q9Y5K1 396 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 RAI2Q9Y5P3 530 aa16.66■□□□□ 0.26
PKD1-225ENST00000562297 HAUS5O94927 633 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 AVPR1AP37288 418 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 LEPRP48357 1165 aaKnown RBP16.65■□□□□ 0.26
PKD1-225ENST00000562297 NTHL1P78549 312 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 TRAF2Q12933 501 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 NUDCD3Q8IVD9 361 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 ZNF707Q96C28 371 aaPredicted RBP16.65■□□□□ 0.26
PKD1-225ENST00000562297 RMDN2Q96LZ7 410 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 C2orf49Q9BVC5 232 aaPredicted RBP16.65■□□□□ 0.26
PKD1-225ENST00000562297 INTS6Q9UL03 887 aaKnown RBP16.65■□□□□ 0.26
PKD1-225ENST00000562297 FCF1Q9Y324 198 aaKnown RBP16.65■□□□□ 0.26
PKD1-225ENST00000562297 SOBPA7XYQ1 873 aa16.65■□□□□ 0.26
PKD1-225ENST00000562297 K7ERQ8 282 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms