RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 GJA9P57773 515 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 DNAJB13P59910 316 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 C16orf72Q14CZ0 275 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 FAM83EQ2M2I3 478 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 SV2CQ496J9 727 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 C6orf10Q5SRN2 563 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 CTU1Q7Z7A3 348 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 BIRC8Q96P09 236 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 WDCPQ9H6R7 721 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 MEAF6Q9HAF1 191 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 IL1RL2Q9HB29 575 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 GMPR2Q9P2T1 348 aaKnown RBP14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 CD300AQ9UGN4 299 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 SARDHQ9UL12 918 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 WDR90Q96KV7 1748 aa14.08□□□□□ -0.16
VPS9D1-202ENST00000561976 KCNA5P22460 613 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 POLD2P49005 469 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 NHSL2Q5HYW2 709 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 PPP4R4Q6NUP7 873 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 RWDD4Q6NW29 188 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 DUS1LQ6P1R4 473 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 ZNF554Q86TJ5 538 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 OR2T34Q8NGX1 318 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 OR2T3Q8NH03 318 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 FNDC8Q8TC99 324 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TRPC4APQ8TEL6 797 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 EDEM1Q92611 657 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 RNF34Q969K3 372 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TCF12Q99081 682 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 OSMRQ99650 979 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TKTL2Q9H0I9 626 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 DUS2Q9NX74 493 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TMEM181Q9P2C4 612 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 RBPJLQ9UBG7 517 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 COL1A2P08123 1366 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 A0A087WXM4 84 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 ASB14A6NK59 587 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TPST1O60507 370 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 LRIG2O94898 1065 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 BMP10O95393 424 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 USP17L7P0C7H9 530 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 CPB1P15086 417 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TSPAN8P19075 237 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 YWHAQP27348 245 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 ENTPD1P49961 510 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 STX1BP61266 288 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 SCAPQ12770 1279 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 PPIL2Q13356 520 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 PSMD5Q16401 504 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 TBCELQ5QJ74 424 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 PAQR9Q6ZVX9 377 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 CNTN4Q8IWV2 1026 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 RBM12BQ8IXT5 1001 aaKnown RBP14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 CBR4Q8N4T8 237 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 FAM110BQ8TC76 370 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 KCTD13Q8WZ19 329 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 UHRF1Q96T88 793 aaPredicted RBP14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 C16orf70Q9BSU1 422 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 OSBPL6Q9BZF3 934 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 ELP3Q9H9T3 547 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 PLGRKTQ9HBL7 147 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 ARHGEF38Q9NXL2 777 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 FBXO5Q9UKT4 447 aa14.07□□□□□ -0.16
VPS9D1-202ENST00000561976 A8MT66 165 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ZSCAN9O15535 394 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 XPOTO43592 962 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 IPO13O94829 963 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 PAMP19021 973 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 NME5P56597 212 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 FAM219BQ5XKK7 198 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 CLEC6AQ6EIG7 209 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ALKAL1Q6UXT8 129 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 CROCCP3Q8IVE0 287 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ANKFN1Q8N957 763 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 PPP1R13LQ8WUF5 828 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 TFAP2CQ92754 450 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ISOC1Q96CN7 298 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 CCDC126Q96EE4 140 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 COLEC11Q9BWP8 271 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ATXN3LQ9H3M9 355 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 TDRKHQ9Y2W6 561 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ZSWIM8A7E2V4 1837 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 RNF103-CHMP3A0A140T963 221 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 FAM149AA5PLN7 773 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 AURKAO14965 403 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 PMPCBO75439 489 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 GNAO1P09471 354 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 BAG6P46379 1132 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ARCN1P48444 511 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 DAOAP59103 153 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 POU4F1Q01851 419 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 SOX4Q06945 474 aaPredicted RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 KIF19Q2TAC6 998 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 RBM20Q5T481 1227 aaKnown RBP14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 AGAP9Q5VTM2 703 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 FAM45BPQ6NSW5 357 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 ARHGAP36Q6ZRI8 547 aa14.06□□□□□ -0.16
VPS9D1-202ENST00000561976 PPTC7Q8NI37 304 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms