RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 IGSF6O95976 241 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 CYP1A1P04798 512 aaPredicted RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 PLEKP08567 350 aaPredicted RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 TIMP2P16035 220 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 YBEYP58557 167 aaPredicted RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 IRF4Q15306 451 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 TMEM52BQ4KMG9 183 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 LRRC73Q5JTD7 316 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 LEKR1Q6ZMV7 388 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 OR6C4Q8NGE1 309 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 CPEB1Q9BZB8 566 aaKnown RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 EDEM3Q9BZQ6 932 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 GULP1Q9UBP9 304 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 NOCTQ9UK39 431 aaKnown RBP11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 DOLKQ9UPQ8 538 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 CFAP46Q8IYW2 2715 aa11.96□□□□□ -0.49
CARMIL3-204ENST00000561354 D6RAR5 112 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 EFSO43281 561 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 RASGRP1O95267 797 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CELA2BP08218 269 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CTSEP14091 401 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 ITIH2P19823 946 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 HTR1BP28222 390 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 ERCC5P28715 1186 aaPredicted RBP11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 SLC5A2P31639 672 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CCKBRP32239 447 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 HDAC4P56524 1084 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 RHOAP61586 193 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 UBE2HP62256 183 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CDR2Q01850 454 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 ELP6Q0PNE2 266 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 LRRC14Q15048 493 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 AGERQ15109 404 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 ALG11Q2TAA5 492 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 ZSCAN23Q3MJ62 389 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 XKR5Q6UX68 686 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 RAB11FIP2Q7L804 512 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 GKN2Q86XP6 184 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 HID1Q8IV36 788 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 FBXO39Q8N4B4 442 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CCDC185Q8N715 623 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 RTL3Q8N8U3 475 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 PCDH19Q8TAB3 1148 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 JOSD2Q8TAC2 188 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 GPT2Q8TD30 523 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CCDC74AQ96AQ1 378 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 TMEM74Q96NL1 305 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 GFM1Q96RP9 751 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 WRAP53Q9BUR4 548 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 STRADBQ9C0K7 418 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 CLMPQ9H6B4 373 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 NOL6Q9H6R4 1146 aaKnown RBP11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 SYNDIG1Q9H7V2 258 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 RABGEF1Q9UJ41 708 aa11.95□□□□□ -0.5
CARMIL3-204ENST00000561354 A0A1W2PQM1 296 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 TSPAN11A1L157 253 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 NOBOXO60393 691 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 XPAP23025 273 aaPredicted RBP11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 UGT1A5P35504 534 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 INHBCP55103 352 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 CCL7P80098 99 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 KCNC4Q03721 635 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 GRM3Q14832 879 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 NFATC4Q14934 902 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 UGP2Q16851 508 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 WSCD2Q2TBF2 565 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 ENPP7Q6UWV6 458 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 TRIM72Q6ZMU5 477 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 SLFN11Q7Z7L1 901 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 B3GNT8Q7Z7M8 397 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 ZNF354CQ86Y25 554 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 KYQ8NBH2 561 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 ATL2Q8NHH9 583 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 FAM172AQ8WUF8 416 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 SLC20A1Q8WUM9 679 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 TSACCQ96A04 125 aaPredicted RBP11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 C11orf70Q9BRQ4 267 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 APOOQ9BUR5 198 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 LRRN3Q9H3W5 708 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 EPB41L5Q9HCM4 733 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 GPR34Q9UPC5 381 aa11.94□□□□□ -0.5
CARMIL3-204ENST00000561354 CFAP69A5D8W1 941 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 WASH4PA8MWX3 477 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 RASA4BC9J798 803 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 NVLO15381 856 aaKnown RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 INSIG1O15503 277 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 RASA4O43374 803 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 SLC28A2O43868 658 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 WISP1O95388 367 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 GJB6O95452 261 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 ITGB2P05107 769 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 RPLP0P05388 317 aaKnown RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 KRT3P12035 628 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 UNGP13051 313 aaPredicted RBP11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 CHRNB2P17787 502 aa11.93□□□□□ -0.5
CARMIL3-204ENST00000561354 EEF1GP26641 437 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms