RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SYF2O95926 243 aaKnown RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 APODP05090 189 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 FOSL2P15408 326 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 NFKBIAP25963 317 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 GRIA2P42262 883 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 RGRP47804 291 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 STK19P49842 368 aaPredicted RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 POLR2LP62875 67 aaKnown RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 PDE1BQ01064 536 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 NAB1Q13506 487 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 RASA2Q15283 850 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 LONRF1Q17RB8 773 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 SKIDA1Q1XH10 827 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 PUS10Q3MIT2 529 aaKnown RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 DGKKQ5KSL6 1271 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 ATXN7L2Q5T6C5 722 aaPredicted RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 LRRC6Q86X45 466 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 TDRPQ86YL5 185 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 RNF135Q8IUD6 432 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 CTAGE3PQ8IX95 158 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 AGGF1Q8N302 714 aaeCLIP10.39□□□□□ -0.75
USP3-219ENST00000561326 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.39□□□□□ -0.75
USP3-219ENST00000561326 ST13P5Q8NFI4 369 aaPredicted RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 BRSK1Q8TDC3 778 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 PDCD6IPQ8WUM4 868 aaKnown RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 MYLIPQ8WY64 445 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 ZNF641Q96N77 438 aaPredicted RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 TNKS2Q9H2K2 1166 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 CHRAC1Q9NRG0 131 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 GTSE1Q9NYZ3 720 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 HACD3Q9P035 362 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 VPS18Q9P253 973 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 TXNDC16Q9P2K2 825 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 EVLQ9UI08 416 aaPredicted RBP10.39□□□□□ -0.75
USP3-219ENST00000561326 SLCO3A1Q9UIG8 710 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 CHKBQ9Y259 395 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 PCDHGC4Q9Y5F7 938 aa10.39□□□□□ -0.75
USP3-219ENST00000561326 OTOL1A6NHN0 477 aaPredicted RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 C2orf81A6NN90 581 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 NPC1O15118 1278 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 BNIP3LO60238 219 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 ALDH1A2O94788 518 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 PAPSS2O95340 614 aaPredicted RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 INHBAP08476 426 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 PRKCHP24723 683 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 CHRNA4P43681 627 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 MGAT5Q09328 741 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 SEPT6Q14141 434 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 CRYMQ14894 314 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 KBTBD12Q3ZCT8 623 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 FNDC3BQ53EP0 1204 aaKnown RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 TMEM215Q68D42 235 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 TAOK1Q7L7X3 1001 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 C12orf40Q86WS4 652 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 TERB1Q8NA31 727 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 EPS8L3Q8TE67 593 aaKnown RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 CYB5D2Q8WUJ1 264 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 PPM1EQ8WY54 764 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 PEX13Q92968 403 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 ZNF669Q96BR6 464 aaPredicted RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 LRIG1Q96JA1 1093 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 ATP6V1G3Q96LB4 118 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 TRIB3Q96RU7 358 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 HEPHQ9BQS7 1158 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 WDR83Q9BRX9 315 aaKnown RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 RPP25Q9BUL9 199 aaKnown RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 PHF7Q9BWX1 381 aaPredicted RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 TDRD1Q9BXT4 1180 aaKnown RBP10.38□□□□□ -0.75
USP3-219ENST00000561326 TRABDQ9H4I3 376 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 SUV39H2Q9H5I1 410 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 TRPV5Q9NQA5 729 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 NSMCE4AQ9NXX6 385 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 FAM53CQ9NYF3 392 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 MOCS1Q9NZB8 636 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 PRKAG3Q9UGI9 489 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 SUN2Q9UH99 717 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 RIMKLBQ9ULI2 386 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 TCAF1Q9Y4C2 921 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 PCDHB9Q9Y5E1 797 aa10.38□□□□□ -0.75
USP3-219ENST00000561326 TCF20Q9UGU0 1960 aaKnown RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 F5P12259 2224 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 EDDM13A0A1B0GTR0 161 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 MROH6A6NGR9 719 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 FAM159BA6NKW6 160 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 WASH3PC4AMC7 463 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 TRIM24O15164 1050 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 ZNF821O75541 412 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 GJB3O75712 270 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 KAT7O95251 611 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 PGLSO95336 258 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 PRLP01236 227 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 ATXN1LP0C7T5 689 aaKnown RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 SP100P23497 879 aaPredicted RBP10.37□□□□□ -0.75
USP3-219ENST00000561326 OPRD1P41143 372 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 TNFRSF4P43489 277 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 SLCO1A2P46721 670 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 GRIA4P48058 902 aa10.37□□□□□ -0.75
USP3-219ENST00000561326 SERPINB9P50453 376 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms