RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	TCRBV5S1A1T	A0A578	114 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	SIGLEC16	A6NMB1	481 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	ATMIN	O43313	823 aa	Predicted RBP	13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	PCCB	P05166	539 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	CALB1	P05937	261 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	C6	P13671	934 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	RGR	P47804	291 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	ZNF143	P52747	638 aa	Predicted RBP	13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	PPARD	Q03181	441 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	RAD51	Q06609	339 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	PTK2B	Q14289	1009 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	CA9	Q16790	459 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	C6orf132	Q5T0Z8	1188 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	MACC1	Q6ZN28	852 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	RBM44	Q6ZP01	1051 aa	Known RBP	13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	ZSWIM9	Q86XI8	627 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	KY	Q8NBH2	561 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	PCDH19	Q8TAB3	1148 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	BTN2A2	Q8WVV5	523 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	ASB12	Q8WXK4	309 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	ARHGEF26	Q96DR7	871 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	AGPAT1	Q99943	283 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	CCDC3	Q9BQI4	270 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	BOC	Q9BWV1	1114 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	USP29	Q9HBJ7	922 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	UBA2	Q9UBT2	640 aa	Predicted RBP	13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	RABGEF1	Q9UJ41	708 aa		13.53	□□□□□ -0.24
PSME1-208	ENST00000561059	LGALS16	A8MUM7	142 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	LMO7DN	F2Z398	122 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	BUB1B	O60566	1050 aa	Predicted RBP	13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	RBMS1	P29558	406 aa	Known RBP	13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	PDX1	P52945	283 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	GSC	P56915	257 aa	Predicted RBP	13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	INPP5A	Q14642	412 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	LRRC14	Q15048	493 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	ALG11	Q2TAA5	492 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	TAF1B	Q53T94	588 aa	Predicted RBP	13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	DCUN1D2	Q6PH85	259 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	ENPP7	Q6UWV6	458 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	B3GNT8	Q7Z7M8	397 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	ZSCAN30	Q86W11	494 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	CAMK1D	Q8IU85	385 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	SFTPA2	Q8IWL1	248 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	LSMEM2	Q8N112	164 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	ZNF843	Q8N446	348 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	PRR11	Q96HE9	360 aa	Predicted RBP	13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	C1QTNF7	Q9BXJ2	289 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	FOXP3	Q9BZS1	431 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	THSD1	Q9NS62	852 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	DKK3	Q9UBP4	350 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	PADI4	Q9UM07	663 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	DOLK	Q9UPQ8	538 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	DAAM1	Q9Y4D1	1078 aa		13.52	□□□□□ -0.25
PSME1-208	ENST00000561059	ASH1L	Q9NR48	2969 aa	Known RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	COL27A1	Q8IZC6	1860 aa	Predicted RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	CXorf51A	A0A1B0GTR3	108 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TEX51	A0A1B0GUA7	166 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059		A8MX80	341 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TPP1	O14773	563 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	DXO	O77932	396 aa	Known RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TNFSF15	O95150	251 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	RPIA	P49247	311 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	LIG3	P49916	1009 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	PAPOLA	P51003	745 aa	Known RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TMPRSS3	P57727	454 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	YBEY	P58557	167 aa	Predicted RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TPI1	P60174	286 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	ERVPABLB-1	P60509	514 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	YPEL5	P62699	121 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	PARP15	Q460N3	678 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TMEM52B	Q4KMG9	183 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	INO80D	Q53TQ3	878 aa	Predicted RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	PPP1R15B	Q5SWA1	713 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	BROX	Q5VW32	411 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	ARHGAP36	Q6ZRI8	547 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	UMODL1-AS1	Q8N2C9	162 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	PLA2G15	Q8NCC3	412 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TSEN2	Q8NCE0	465 aa	Known RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	GLMN	Q92990	594 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	CCDC74A	Q96AQ1	378 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	SLC46A1	Q96NT5	459 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	CNPY3	Q9BT09	278 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	TRIM7	Q9C029	511 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	SEMA4C	Q9C0C4	833 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	SUV39H2	Q9H5I1	410 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	DHX35	Q9H5Z1	703 aa	Known RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	RETREG1	Q9H6L5	497 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	LRRC19	Q9H756	370 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	CATSPERB	Q9H7T0	1116 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	PDF	Q9HBH1	243 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	NCKIPSD	Q9NZQ3	722 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	LIMA1	Q9UHB6	759 aa	Known RBP	13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	PCSK1N	Q9UHG2	260 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	GPR34	Q9UPC5	381 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	MFHAS1	Q9Y4C4	1052 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	CHD5	Q8TDI0	1954 aa		13.51	□□□□□ -0.25
PSME1-208	ENST00000561059	RP1	P56715	2156 aa		13.5	□□□□□ -0.25
PSME1-208	ENST00000561059	TTC24	A2A3L6	582 aa	Predicted RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms