RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ATP1A1P05023 1023 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 IGHV4-34P06331 123 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 STIP1P31948 543 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 CD68P34810 354 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ABL2P42684 1182 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PTGER3P43115 390 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ATP5OP48047 213 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 RPL26P61254 145 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 DSC2Q02487 901 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ELP6Q0PNE2 266 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 TRAF2Q12933 501 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 OASLQ15646 514 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 CCNG2Q16589 344 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 TMEM52BQ4KMG9 183 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 WDR45BQ5MNZ6 344 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PLA2G2CQ5R387 149 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 SYCP2LQ5T4T6 812 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PRPF39Q86UA1 669 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ZSWIM9Q86XI8 627 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 SYT12Q8IV01 421 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 KLHDC8BQ8IXV7 354 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF567Q8N184 647 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 OR14C36Q8NHC7 312 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ACTRT1Q8TDG2 376 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 FEM1CQ96JP0 617 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 FCRL5Q96RD9 977 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 OSBPL9Q96SU4 736 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ORAI3Q9BRQ5 295 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 GLOD4Q9HC38 313 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 HOMER3Q9NSC5 361 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PILRBQ9UKJ0 227 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 DNPEPQ9ULA0 475 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PHTF1Q9UMS5 762 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 RPL26L1Q9UNX3 145 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 DMTF1Q9Y222 760 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 DRG1Q9Y295 367 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 R3HDM2Q9Y2K5 976 aaKnown RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 PCDHGC4Q9Y5F7 938 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 LRP4O75096 1905 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 CABIN1Q9Y6J0 2220 aa9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 EP300Q09472 2414 aaPredicted RBP9.71□□□□□ -0.86
RABGGTA-221ENST00000561055 ZNF292O60281 2723 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ZFC3H1O60293 1989 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 LAMA1P25391 3075 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3DA0A087WVF3 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3IA0A087WXS9 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3EA0A087X179 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3KA0A087X1G2 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 A0A1W2PPC4 97 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TTC24A2A3L6 582 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3FA6NER0 549 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 UPK3BL1B0FP48 263 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3LB9A6J9 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 UPK3BL2E5RIL1 263 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 RIOK3O14730 519 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 LIASO43766 372 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 CEP104O60308 925 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 GCATO75600 419 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 GJB3O75712 270 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 NEBLO76041 1014 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 PGLSO95336 258 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 PRLP01236 227 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 EPOP01588 193 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 FGGP02679 453 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ITGAVP06756 1048 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3HP0C7X1 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TCP1P17987 556 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 CA4P22748 312 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 NFKBIAP25963 317 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 CD27P26842 260 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 CXCR5P32302 372 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 DHPSP49366 369 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 GNG11P61952 73 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 SKOR1P84550 965 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ITKQ08881 620 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 AGERQ15109 404 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 POM121L1PQ3SYA9 428 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TMEM259Q4ZIN3 620 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ANKRD20A2Q5SQ80 823 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ARMC12Q5T9G4 340 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ANKRD20A1Q5TYW2 823 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ANKRD20A3Q5VUR7 823 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 LYSMD4Q5XG99 296 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3GQ6DHY5 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3CQ6IPX1 549 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 KIAA1161Q6NSJ0 714 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 B4GALNT4Q76KP1 1039 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 PID1Q7Z2X4 250 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 RABEPKQ7Z6M1 372 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 HORMAD1Q86X24 394 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 RAVER1Q8IY67 606 aaKnown RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 TBC1D3Q8IZP1 549 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 CBARPQ8N350 705 aaPredicted RBP9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 CEP76Q8TAP6 659 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 PIH1D2Q8WWB5 315 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 RUBCNQ92622 972 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 SCRN2Q96FV2 425 aa9.7□□□□□ -0.86
RABGGTA-221ENST00000561055 HSPA12BQ96MM6 686 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms