RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 COL6A2P12110 1019 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MLNP12872 115 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 JUNBP17275 347 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 JAK1P23458 1154 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 KDELR1P24390 212 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 DNAJB1P25685 340 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 PIK3R1P27986 724 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC7A1P30825 629 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 IGFALSP35858 605 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC16A2P36021 539 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GJC1P36383 396 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CAP2P40123 477 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GARSP41250 739 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MAGEA3P43357 314 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MAGEA12P43365 314 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 STT3AP46977 705 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 RARRES1P49788 294 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CCT8P50990 548 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 NDST2P52849 883 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 THOP1P52888 689 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 AP3M2P53677 418 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC5A3P53794 718 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TMBIM6P55061 237 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 NME5P56597 212 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ARPC4P59998 168 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 EIF3EP60228 445 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MYL6P60660 151 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 BASP1P80723 227 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MRPS22P82650 360 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC25A11Q02978 314 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GRAPQ13588 217 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CUL2Q13617 745 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ZNF846Q147U1 533 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SPCS2Q15005 226 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MAPRE2Q15555 327 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 DPY19L1Q2PZI1 675 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TCHHL1Q5QJ38 904 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ZFYVE27Q5T4F4 411 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 AGAP7PQ5VUJ5 663 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SPOPLQ6IQ16 392 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 PPP4R4Q6NUP7 873 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 LETMD1Q6P1Q0 360 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 C16orf87Q6PH81 154 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 UBE2R2Q712K3 238 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 KCTD1Q719H9 257 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ILDR2Q71H61 639 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MAVSQ7Z434 540 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CBWD2Q8IUF1 395 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CTAGE3PQ8IX95 158 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ADGRF2Q8IZF7 708 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 DSELQ8IZU8 1212 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 LILRA2Q8N149 483 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TMEM35BQ8NCS4 154 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CMASQ8NFW8 434 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 RDH11Q8TC12 318 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GRAPLQ8TC17 118 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 PPP1R13LQ8WUF5 828 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 S100ZQ8WXG8 99 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CDKL2Q92772 493 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 RCC1LQ96I51 464 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MAGED4Q96JG8 741 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 HEPHQ9BQS7 1158 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 NAT9Q9BTE0 207 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SLC13A1Q9BZW2 595 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 WDR12Q9GZL7 423 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 C20orf27Q9GZN8 174 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 SDCBP2Q9H190 292 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 COPS7BQ9H9Q2 264 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 RSAD1Q9HA92 442 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 PRDM16Q9HAZ2 1276 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MRM3Q9HC36 420 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 OLAHQ9NV23 265 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 MARCOQ9UEW3 520 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 ZC3H7BQ9UGR2 993 aaKnown RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TBX20Q9UMR3 447 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 GPR55Q9Y2T6 319 aaPredicted RBP6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 TSC22D4Q9Y3Q8 395 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 HEY1Q9Y5J3 304 aa6.03□□□□□ -1.44
SNRPA1-209ENST00000560307 CNTNAP2Q9UHC6 1331 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 TCRBV3S1A0A5B6 114 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 BCLAF3A2AJT9 711 aaKnown RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 ZNF839A8K0R7 811 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 FAM47E-STBD1D6RA91 191 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 H3BMQ9 156 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 PAPSS1O43252 624 aaPredicted RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 HTRA2O43464 458 aaPredicted RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 GAS2O43903 313 aaKnown RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 EXTL3O43909 919 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 KLHL41O60662 606 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 STAMBPO95630 424 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 CPNE6O95741 557 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 HLA-DRAP01903 254 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 C4BPAP04003 597 aaKnown RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 CSH1P0DML2 217 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 CSH2P0DML3 217 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 XRCC1P18887 633 aaPredicted RBP6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 TGM2P21980 687 aa6.02□□□□□ -1.45
SNRPA1-209ENST00000560307 TM4SF1P30408 202 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms