RNA–Protein interactions for RNA: ENST00000560043.1

AC105339.3-201, humanhuman

BASIC

Gene AC105339.3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC105339.3-201ENST00000560043 DENND6BQ8NEG7 585 aa17.47■□□□□ 0.39
AC105339.3-201ENST00000560043 PCDH19Q8TAB3 1148 aa17.47■□□□□ 0.39
AC105339.3-201ENST00000560043 C1QTNF7Q9BXJ2 289 aa17.47■□□□□ 0.39
AC105339.3-201ENST00000560043 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 POM121BA6NF01 834 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 MUSKO15146 869 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 TNFSF14O43557 240 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 PEX11BO96011 259 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 RABIFP47224 123 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 POLR2LP62875 67 aaKnown RBP17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 BNIP3Q12983 259 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 MARC1Q5VT66 337 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 CCDC170Q8IYT3 715 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 KLF6Q99612 283 aaPredicted RBP17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 WRAP53Q9BUR4 548 aaKnown RBP17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 PCDH12Q9NPG4 1184 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 FTSJ1Q9UET6 329 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 WASF3Q9UPY6 502 aa17.46■□□□□ 0.39
AC105339.3-201ENST00000560043 RIOK3O14730 519 aaKnown RBP17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 MFSD11O43934 449 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 TOP3BO95985 862 aaKnown RBP17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 KDELR1P24390 212 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 SLC1A1P43005 524 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 GALNT2Q10471 571 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 SPA17Q15506 151 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 NCBP2-AS2Q69YL0 99 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 SLCO6A1Q86UG4 719 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 GAS2L3Q86XJ1 694 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 RAPGEF5Q92565 580 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 FAF2Q96CS3 445 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 IFT43Q96FT9 208 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 NUDCD1Q96RS6 583 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 SCUBE2Q9NQ36 999 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 ATP8A1Q9Y2Q0 1164 aa17.45■□□□□ 0.38
AC105339.3-201ENST00000560043 LRRD1A4D1F6 860 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 HYAL3O43820 417 aaPredicted RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 ATXN1LP0C7T5 689 aaKnown RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 SPINK2P20155 84 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 CYLC1P35663 651 aaPredicted RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 GARSP41250 739 aaKnown RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 MMP13P45452 471 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 IFI16Q16666 785 aaKnown RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 RALGPS1Q5JS13 557 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 LRRC38Q5VT99 294 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 KANSL1Q7Z3B3 1105 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 RAB44Q7Z6P3 723 aaPredicted RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 ZSWIM9Q86XI8 627 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 SLC22A18ASQ8N1D0 253 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 PGBD5Q8N414 524 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 CHCHD4Q8N4Q1 142 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 EID2Q8N6I1 236 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 PQLC3Q8N755 202 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 ADAMTS14Q8WXS8 1223 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 CENPTQ96BT3 561 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 ECHDC3Q96DC8 303 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 CNTNAP3BQ96NU0 1288 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 RNF157Q96PX1 679 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 PANX2Q96RD6 677 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 MGME1Q9BQP7 344 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 SCNM1Q9BWG6 230 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 CNTNAP3Q9BZ76 1288 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 LUC7LQ9NQ29 371 aaKnown RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 GPR27Q9NS67 375 aa17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 TP53BP1Q12888 1972 aaPredicted RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 TPRP12270 2363 aaKnown RBP17.44■□□□□ 0.38
AC105339.3-201ENST00000560043 A0A1W2PQ67 120 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 CFAP69A5D8W1 941 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 GOLGA8CPA6NN73 597 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 ZNF487B1APH4 448 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 TRAFD1O14545 582 aaPredicted RBP17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 SOCS5O75159 536 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 LCA5LO95447 670 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 LDOC1O95751 146 aaPredicted RBP17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 CR2P20023 1033 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 MX2P20592 715 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 CCNCP24863 283 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 MMP12P39900 470 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 NOP2P46087 812 aaKnown RBP17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 PFN3P60673 137 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 ODF2Q5BJF6 829 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 TIGD7Q6NT04 549 aaPredicted RBP17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 VSIG1Q86XK7 387 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 RHOT1Q8IXI2 618 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 TEX26Q8N6G2 289 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 PNPLA1Q8N8W4 532 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 NSMCE3Q96MG7 304 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 TSGA13Q96PP4 275 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 NOD2Q9HC29 1040 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 NT5MQ9NPB1 228 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 HAUS2Q9NVX0 235 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 NEUROG3Q9Y4Z2 214 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 PCDHA13Q9Y5I0 950 aa17.43■□□□□ 0.38
AC105339.3-201ENST00000560043 SPTY2D1-AS1A0A0U1RR47 76 aa17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 TTC24A2A3L6 582 aaPredicted RBP17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 MATN3O15232 486 aa17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 SPOPO43791 374 aa17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 LZTS3O60299 673 aaPredicted RBP17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 SDC3O75056 442 aa17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 KRT1P04264 644 aa17.42■□□□□ 0.38
AC105339.3-201ENST00000560043 PRKCGP05129 697 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms