RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 AP2B1P63010 937 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC10A7Q0GE19 358 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 TAF10Q12962 218 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 USP4Q13107 963 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 LBRQ14739 615 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 POLD3Q15054 466 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SMAD1Q15797 465 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC9B1Q4ZJI4 515 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ALFQ53S48 1182 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 TECRLQ5HYJ1 363 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 C10orf120Q5SQS8 335 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SDHAF4Q5VUM1 108 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 C1orf146Q5VVC0 180 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 RAP1GAP2Q684P5 730 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 FAM45BPQ6NSW5 357 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 RIPOR1Q6ZS17 1223 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 TFAP2DQ7Z6R9 452 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 NPAS4Q8IUM7 802 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC22A9Q8IVM8 553 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 APLFQ8IW19 511 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ATAD1Q8NBU5 361 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 GPR150Q8NGU9 434 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 RP9Q8TA86 221 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ARRDC2Q8TBH0 407 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 FAM45AQ8TCE6 357 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 MAPK15Q8TD08 544 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 WDR60Q8WVS4 1066 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 DNAJC9Q8WXX5 260 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SEPT8Q92599 483 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 IGSF8Q969P0 613 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 NXNL1Q96CM4 212 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF333Q96JL9 665 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 MYCBPQ99417 103 aaPredicted RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 THTPAQ9BU02 230 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 TRMOQ9BU70 441 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 POLR1EQ9GZS1 481 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 MARCH5Q9NX47 278 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 NCKIPSDQ9NZQ3 722 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 CPSF2Q9P2I0 782 aaKnown RBP8.15□□□□□ -1.1
SMAD3-212ENST00000559937 HSFX1Q9UBD0 423 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 XPR1Q9UBH6 696 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC2A6Q9UGQ3 507 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 SLC7A8Q9UHI5 535 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 VPS28Q9UK41 221 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 NUDT5Q9UKK9 219 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 LRFN2Q9ULH4 789 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 CDYLQ9Y232 598 aa8.15□□□□□ -1.1
SMAD3-212ENST00000559937 ZNF106Q9H2Y7 1883 aaKnown RBP8.15□□□□□ -1.11
SMAD3-212ENST00000559937 TET1Q8NFU7 2136 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 BRCA2P51587 3418 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 E2F8A0AVK6 867 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CCDC189A1A4V9 331 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CCDC78A2IDD5 438 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 RGSL1A5PLK6 1076 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 SLC38A8A6NNN8 435 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 VGLL3A8MV65 326 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 F5H5T6 163 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 GOLGA8TH3BQL2 631 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ZBTB14O43829 449 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ACSL4O60488 711 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 FKTNO75072 461 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 TBX10O75333 385 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CNTN5O94779 1100 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 WISP3O95389 354 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PARNO95453 639 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 VNN2O95498 520 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 RPSAP08865 295 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ATXN1LP0C7T5 689 aaKnown RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 TFEBP19484 476 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ITGAXP20702 1163 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CES1P23141 567 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PSMA3P25788 255 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 GMPRP36959 345 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PPARGP37231 505 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 AVPR1AP37288 418 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CHRNA4P43681 627 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 NAGLUP54802 743 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 NAA20P61599 178 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PRAMEP78395 509 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 NFKB2Q00653 900 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CAP1Q01518 475 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 DSC2Q02487 901 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ITKQ08881 620 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 NSUN2Q08J23 767 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 DLG1Q12959 904 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 BLMHQ13867 455 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ZNF235Q14590 738 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 RFTN1Q14699 578 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ARHGEF6Q15052 776 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ACAP2Q15057 778 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 PCSK7Q16549 785 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 MUM1Q2TAK8 710 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 ARL13AQ5H913 290 aaPredicted RBP8.14□□□□□ -1.11
SMAD3-212ENST00000559937 SIRPB2Q5JXA9 342 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 RASIP1Q5U651 963 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 LHX8Q68G74 356 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 IRGCQ6NXR0 463 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 KLHDC10Q6PID8 442 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 CNSTQ6PJW8 725 aa8.14□□□□□ -1.11
SMAD3-212ENST00000559937 C16orf89Q6UX73 402 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms