RNA–Protein interactions for RNA: ENST00000559496.5

ZEB1-216, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-216ENST00000559496 MCRS1Q96EZ8 462 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 SMARCD1Q96GM5 515 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 TMEM169Q96HH4 297 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 HSFY1Q96LI6 401 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 ZNF558Q96NG5 402 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 NR1H4Q96RI1 486 aaPredicted RBP7.19□□□□□ -1.26
ZEB1-216ENST00000559496 HAPLN3Q96S86 360 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 PKMYT1Q99640 499 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 LBHD1Q9BQE6 289 aaPredicted RBP7.19□□□□□ -1.26
ZEB1-216ENST00000559496 TTPALQ9BTX7 342 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 MRPL46Q9H2W6 279 aaKnown RBP7.19□□□□□ -1.26
ZEB1-216ENST00000559496 TMLHEQ9NVH6 421 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 DKK3Q9UBP4 350 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 IP6K2Q9UHH9 426 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 ZMYND8Q9ULU4 1186 aaPredicted RBP7.19□□□□□ -1.26
ZEB1-216ENST00000559496 ALG6Q9Y672 507 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 MRPL42Q9Y6G3 142 aaKnown RBP7.19□□□□□ -1.26
ZEB1-216ENST00000559496 VWA8A3KMH1 1905 aa7.19□□□□□ -1.26
ZEB1-216ENST00000559496 HTR3EA5X5Y0 456 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 MIF4GDA9UHW6 222 aaKnown RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 KCNK3O14649 394 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ZNF185O15231 689 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 PAPSS1O43252 624 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 BEST1O76090 585 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 OR4Q2P0C623 313 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 LCP1P13796 627 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 S100A1P23297 94 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 BDNFP23560 247 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 FPR2P25090 351 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 PSMA2P25787 234 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 CXCR5P32302 372 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 MAN1A1P33908 653 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 LTBRP36941 435 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 RPL34P49207 117 aaKnown RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 MAP3K7CLP57077 242 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SLC6A3Q01959 620 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ADIGQ0VDE8 80 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 PIGHQ14442 188 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 NFE2Q16621 373 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 PRSS53Q2L4Q9 553 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SLC39A12Q504Y0 691 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 FAAH2Q6GMR7 532 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 TMEM154Q6P9G4 183 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 LRIG3Q6UXM1 1119 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ANKS3Q6ZW76 656 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ZNF572Q7Z3I7 529 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 MILR1Q7Z6M3 343 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 LRRTM3Q86VH5 581 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 HOOK3Q86VS8 718 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ZDHHC17Q8IUH5 632 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SPATA2LQ8IUW3 424 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SIX6OS1Q8N1H7 587 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SLC39A11Q8N1S5 342 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 UBL4BQ8N7F7 174 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 COLGALT1Q8NBJ5 622 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 TMEM145Q8NBT3 493 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 JOSD2Q8TAC2 188 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ARL8AQ96BM9 186 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ZBTB8AQ96BR9 441 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 CENPTQ96BT3 561 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 HES6Q96HZ4 224 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ABHD8Q96I13 439 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 IGSF21Q96ID5 467 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 PBKQ96KB5 322 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 CAPZA3Q96KX2 299 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 B3GALT6Q96L58 329 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SMOQ99835 787 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SPATA25Q9BR10 227 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 FAM167BQ9BTA0 163 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 RHOBTB2Q9BYZ6 727 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 ZCWPW1Q9H0M4 648 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 CARD9Q9H257 536 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 MTIF3Q9H2K0 278 aaKnown RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 LRRC4Q9HBW1 653 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SPATA6Q9NWH7 488 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-216ENST00000559496 SPG21Q9NZD8 308 aa7.18□□□□□ -1.26
ZEB1-216ENST00000559496 PTPRSQ13332 1948 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 H7BY64 318 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 CES2O00748 559 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 MTRF1O75570 445 aaKnown RBP7.17□□□□□ -1.26
ZEB1-216ENST00000559496 GRAP2O75791 330 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 GJB5O95377 273 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 CCDC159P0C7I6 412 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 GNAZP19086 355 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 GPD1P21695 349 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 CTNNA2P26232 953 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 CTNNA1P35221 906 aaKnown RBP7.17□□□□□ -1.26
ZEB1-216ENST00000559496 RFC1P35251 1148 aaPredicted RBP7.17□□□□□ -1.26
ZEB1-216ENST00000559496 PCK1P35558 622 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 PPM1AP35813 382 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 PAFAH1B1P43034 410 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 PMS2P54278 862 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 CACNA2D1P54289 1103 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 ARPP19P56211 112 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 RNASE9P60153 205 aaKnown RBP7.17□□□□□ -1.26
ZEB1-216ENST00000559496 HTRA4P83105 476 aaPredicted RBP7.17□□□□□ -1.26
ZEB1-216ENST00000559496 OGDHQ02218 1023 aa7.17□□□□□ -1.26
ZEB1-216ENST00000559496 USP41Q3LFD5 358 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms