RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ZNF670Q9BS34 389 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 RBSNQ9H1K0 784 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 ERVMER34-1Q9H9K5 563 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 NT5MQ9NPB1 228 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 PCDH12Q9NPG4 1184 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 SCUBE2Q9NQ36 999 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 DNAJC28Q9NX36 388 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 DKK3Q9UBP4 350 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 COQ6Q9Y2Z9 468 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 TTLL3Q9Y4R7 772 aa8.27□□□□□ -1.09
SNX1-207ENST00000559401 COL5A1P20908 1838 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 LAMA1P25391 3075 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 CABIN1Q9Y6J0 2220 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 TTC24A2A3L6 582 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 H3BM21 787 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 ENC1O14682 589 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 AREL1O15033 823 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 MUSKO15146 869 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 FFAR2O15552 330 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 TNFSF14O43557 240 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 SPOPO43791 374 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 LZTS3O60299 673 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 BUB1BO60566 1050 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 MAFKO60675 156 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 CPP00450 1065 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 C6P13671 934 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 HSPA9P38646 679 aaKnown RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 MAGEA1P43355 309 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 MMP13P45452 471 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 RABIFP47224 123 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 RXRGP48443 463 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 CSNK1DP48730 415 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 ZNF75DP51815 510 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 MAXP61244 160 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 POLR2LP62875 67 aaKnown RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 SHC2P98077 582 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 DAB2P98082 770 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 PDE1CQ14123 709 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 SPA17Q15506 151 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 ANKRD20A8PQ5CZ79 823 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 NCBP2-AS2Q69YL0 99 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 KDM7AQ6ZMT4 941 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 ABI3BPQ7Z7G0 1075 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 GLRX5Q86SX6 157 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 DCP2Q8IU60 420 aaKnown RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 TC2NQ8N9U0 490 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 CCNYQ8ND76 341 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 DENND6BQ8NEG7 585 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 PCDH19Q8TAB3 1148 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 BAHD1Q8TBE0 780 aaPredicted RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 FAM174AQ8TBP5 190 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 SAP25Q8TEE9 199 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 TSC1Q92574 1164 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 LUC7LQ9NQ29 371 aaKnown RBP8.26□□□□□ -1.09
SNX1-207ENST00000559401 HAUS2Q9NVX0 235 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 KLK13Q9UKR3 277 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 ATP8A1Q9Y2Q0 1164 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 HYOU1Q9Y4L1 999 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 HS3ST3A1Q9Y663 406 aa8.26□□□□□ -1.09
SNX1-207ENST00000559401 TSPAN11A1L157 253 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 A8MX80 341 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 RIOK3O14730 519 aaKnown RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 PCCBP05166 539 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 ELFN1P0C7U0 828 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 ALPPL2P10696 532 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 MX2P20592 715 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 KDELR1P24390 212 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 IL4RP24394 825 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 NFKBIAP25963 317 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 IGFALSP35858 605 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 MMP12P39900 470 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 GARSP41250 739 aaKnown RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 ARHGAP25P42331 645 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 LIG3P49916 1009 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 ARSEP51690 589 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 GBE1Q04446 702 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 NSUN2Q08J23 767 aaKnown RBP eCLIP8.25□□□□□ -1.09
SNX1-207ENST00000559401 GALNT2Q10471 571 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 DNAJC3Q13217 504 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 LRRC14Q15048 493 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 PAFAH1B3Q15102 231 aaKnown RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 IRF4Q15306 451 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 IFI16Q16666 785 aaKnown RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 TMEM52BQ4KMG9 183 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 DENND2CQ68D51 928 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 TIGD7Q6NT04 549 aaPredicted RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 DBX2Q6ZNG2 339 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 RAB44Q7Z6P3 723 aaPredicted RBP8.25□□□□□ -1.09
SNX1-207ENST00000559401 SLCO6A1Q86UG4 719 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 PARGQ86W56 976 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 ZSWIM9Q86XI8 627 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 RFX6Q8HWS3 928 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 SLC22A18ASQ8N1D0 253 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 FAM71BQ8TC56 605 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 HCAR2Q8TDS4 363 aa8.25□□□□□ -1.09
SNX1-207ENST00000559401 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms