RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GCATO75600 419 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 TUBB4AP04350 444 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 TIMP2P16035 220 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 NBL1P41271 181 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 SUOXP51687 545 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 SIM2Q14190 667 aaPredicted RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 UGP2Q16851 508 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 PLK5Q496M5 336 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 ARMC12Q5T9G4 340 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 OR2T34Q8NGX1 318 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 OR14C36Q8NHC7 312 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 SPATA22Q8NHS9 363 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 ATOH1Q92858 354 aaPredicted RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 OXNAD1Q96HP4 312 aaPredicted RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 ZC3H10Q96K80 434 aaKnown RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 GPR174Q9BXC1 333 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 DUSP15Q9H1R2 295 aaPredicted RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 PREBQ9HCU5 417 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 FAM86C1Q9NVL1 165 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 RNF14Q9UBS8 474 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 ITM2BQ9Y287 266 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 DRG1Q9Y295 367 aaKnown RBP21.85■■□□□ 1.09
SNX1-206ENST00000559389 PCDHB9Q9Y5E1 797 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 FADS3Q9Y5Q0 445 aa21.85■■□□□ 1.09
SNX1-206ENST00000559389 LRRC72A6NJI9 287 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 F5H423 210 aaPredicted RBP21.84■■□□□ 1.09
SNX1-206ENST00000559389 MAP3K13O43283 966 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 MT-CYBP00156 380 aaPredicted RBP21.84■■□□□ 1.09
SNX1-206ENST00000559389 PSMB4P28070 264 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 LRRC73Q5JTD7 316 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 TTC27Q6P3X3 843 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 KDELC1Q6UW63 502 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 LPCAT2Q7L5N7 544 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 PAF1Q8N7H5 531 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 CADM4Q8NFZ8 388 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 PDCD6IPQ8WUM4 868 aaKnown RBP21.84■■□□□ 1.09
SNX1-206ENST00000559389 MAGOHBQ96A72 148 aaKnown RBP21.84■■□□□ 1.09
SNX1-206ENST00000559389 VPS45Q9NRW7 570 aa21.84■■□□□ 1.09
SNX1-206ENST00000559389 TNRC6BQ9UPQ9 1833 aaKnown RBP21.84■■□□□ 1.09
SNX1-206ENST00000559389 PDE2AO00408 941 aaPredicted RBP21.83■■□□□ 1.09
SNX1-206ENST00000559389 PRLP01236 227 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 PDHA1P08559 390 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 XPAP23025 273 aaPredicted RBP21.83■■□□□ 1.09
SNX1-206ENST00000559389 KCNJ1P48048 391 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 ELF2Q15723 593 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 SPDYCQ5MJ68 293 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 PRR23BQ6ZRT6 265 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 ARHGEF18Q6ZSZ5 1173 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 TTC7BQ86TV6 843 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 KLHDC8BQ8IXV7 354 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 PPP1R2P1Q96PQ5 205 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 TRIB3Q96RU7 358 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 C6orf106Q9H6K1 298 aaPredicted RBP21.83■■□□□ 1.09
SNX1-206ENST00000559389 PCDH9Q9HC56 1237 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 PCDH12Q9NPG4 1184 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 UBP1Q9NZI7 540 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 FAM153AQ9UHL3 310 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 GGT7Q9UJ14 662 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 CHKBQ9Y259 395 aa21.83■■□□□ 1.09
SNX1-206ENST00000559389 NUMA1Q14980 2115 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 FAM47DPA6NHR8 397 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 IFNB1P01574 187 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 PRKCGP05129 697 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 MMP12P39900 470 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 PAFAH1B1P43034 410 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 FNTAP49354 379 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 RPL26P61254 145 aaKnown RBP21.82■■□□□ 1.08
SNX1-206ENST00000559389 PPP2CBP62714 309 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 POLR2LP62875 67 aaKnown RBP21.82■■□□□ 1.08
SNX1-206ENST00000559389 PPP2CAP67775 309 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 ELP6Q0PNE2 266 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 MPP3Q13368 585 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 KIAA0895LQ68EN5 471 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 SLC41A1Q8IVJ1 513 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 TMEFF1Q8IYR6 380 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 CCDC89Q8N998 374 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 GLIS1Q8NBF1 620 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 PIH1D2Q8WWB5 315 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 HSPA12BQ96MM6 686 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 MLPHQ9BV36 600 aaPredicted RBP21.82■■□□□ 1.08
SNX1-206ENST00000559389 PHTF1Q9UMS5 762 aa21.82■■□□□ 1.08
SNX1-206ENST00000559389 RPL26L1Q9UNX3 145 aaKnown RBP21.82■■□□□ 1.08
SNX1-206ENST00000559389 SMG5Q9UPR3 1016 aaKnown RBP21.82■■□□□ 1.08
SNX1-206ENST00000559389 ARIH1Q9Y4X5 557 aaPredicted RBP21.82■■□□□ 1.08
SNX1-206ENST00000559389 PRR23AA6NEV1 266 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 TSPAN6O43657 245 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 PMPCBO75439 489 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 ANXA9O76027 345 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 RHOBTB1O94844 696 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 METTL18O95568 372 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 COILP38432 576 aaPredicted RBP21.81■■□□□ 1.08
SNX1-206ENST00000559389 GEMP55040 296 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 WNT3AP56704 352 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 PCSK7Q16549 785 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 PARP6Q2NL67 630 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 ERAP2Q6P179 960 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 NEK5Q6P3R8 708 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 TRIM69Q86WT6 500 aa21.81■■□□□ 1.08
SNX1-206ENST00000559389 LPCAT1Q8NF37 534 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms