RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ZNF474Q6S9Z5 364 aaPredicted RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 LCTLQ6UWM7 567 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 GLDNQ6ZMI3 551 aaPredicted RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 RBM44Q6ZP01 1051 aaKnown RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC91Q7Z6B0 441 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 TFAP2DQ7Z6R9 452 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 MRGPREQ86SM8 312 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 KBTBD6Q86V97 674 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 VRK3Q8IV63 474 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 CEP97Q8IW35 865 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 THNSL1Q8IYQ7 743 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 TTC9BQ8N6N2 239 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 NKAIN3Q8N8D7 197 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 GPR150Q8NGU9 434 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 GSDMBQ8TAX9 411 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 CACTINQ8WUQ7 758 aaKnown RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 ZFPM2Q8WW38 1151 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 RMDN1Q96DB5 314 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 ARHGEF26Q96DR7 871 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC34Q96HJ3 373 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 KAZALD1Q96I82 304 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 HARBI1Q96MB7 349 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM68Q96MH6 324 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 PAFAH2Q99487 392 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 KIFC3Q9BVG8 833 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 CCDC106Q9BWC9 280 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 TM2D2Q9BX73 214 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 OSGEPL1Q9H4B0 414 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 PLK3Q9H4B4 646 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 AAMDCQ9H7C9 122 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 ERVMER34-1Q9H9K5 563 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF304Q9HCX3 659 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 LTB4R2Q9NPC1 389 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 PAPOLBQ9NRJ5 636 aaKnown RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 SEC63Q9UGP8 760 aaKnown RBP2.39□□□□□ -2.03
GABPB1-209ENST00000559100 RASAL2Q9UJF2 1139 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 TESMINQ9Y4I5 508 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 CLDN16Q9Y5I7 305 aa2.39□□□□□ -2.03
GABPB1-209ENST00000559100 A0A096LPK6 155 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 A0A0A0MQY5 61 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 A0A0G2JLL6 359 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 FAM237AA0A1B0GTK4 181 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 A0A1W2PQF6 199 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TCRBV5S1A1TA0A578 114 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SLC22A23A1A5C7 686 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ARHGEF37A1IGU5 675 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 A8MZ25 164 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TARM1B6A8C7 271 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 FAM157AC9JC47 383 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 NPIPB11E5RHQ5 1161 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 H7C1Q1 480 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 RHODO00212 210 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PSMA7O14818 248 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SCAMP1O15126 338 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 IPO8O15397 1037 aaKnown RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 RNMTO43148 476 aaKnown RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 AVILO75366 819 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SLU7O95391 586 aaKnown RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PLAUP00749 431 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TUBBP07437 444 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CHRM5P08912 532 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SCG2P13521 617 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 FDPSP14324 419 aaKnown RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ATF7P17544 494 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TFEBP19484 476 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MAKP20794 623 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 GPD1P21695 349 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 BMP5P22003 454 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CPT2P23786 658 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MCM7P33993 719 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 THPOP40225 353 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 MPLP40238 635 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 GPR12P47775 334 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SOX2P48431 317 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CLCN3P51790 818 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PPP5CP53041 499 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PMS2P54278 862 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CAPSQ13938 189 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 KCNC3Q14003 757 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SEMA3AQ14563 771 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF268Q14587 947 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ZNF169Q14929 603 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TCTN1Q2MV58 587 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ASTE1Q2TB18 679 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 LETM2Q2VYF4 491 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 TMEM119Q4V9L6 283 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SYTL3Q4VX76 610 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 KRBOX4Q5JUW0 171 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 SUMO4Q6EEV6 95 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 Q6YL49 198 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CLEC17AQ6ZS10 378 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 RHOUQ7L0Q8 258 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 CADM3Q8N126 398 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 OR8H3Q8N146 312 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 PAQR4Q8N4S7 273 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 HORMAD2Q8N7B1 307 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 ARL14EPQ8N8R7 260 aaPredicted RBP2.38□□□□□ -2.03
GABPB1-209ENST00000559100 LRRC57Q8N9N7 239 aa2.38□□□□□ -2.03
GABPB1-209ENST00000559100 IL17RCQ8NAC3 791 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms