RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ADAT2Q7Z6V5 191 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 ELOA2Q8IYF1 753 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 SCML4Q8N228 414 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 CHCHD4Q8N4Q1 142 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 C1orf131Q8NDD1 294 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 ZNF606Q8WXB4 792 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 NAF1Q96HR8 494 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 EAF1Q96JC9 268 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 RPL10LQ96L21 214 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 TMEM245Q9H330 911 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 GAREM1Q9H706 876 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 DDIT4Q9NX09 232 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 IMPACTQ9P2X3 320 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 RWDD2AQ9UIY3 292 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 RALYQ9UKM9 306 aaKnown RBP7.56□□□□□ -1.2
SPG11-213ENST00000558988 KLK13Q9UKR3 277 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 TLR6Q9Y2C9 796 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 SLCO1B1Q9Y6L6 691 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 FRYLO94915 3013 aa7.56□□□□□ -1.2
SPG11-213ENST00000558988 PCDH15Q96QU1 1955 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 BECN2A8MW95 431 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 TTC34A8MYJ7 566 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 F5H5T6 163 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 KCNK3O14649 394 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 MID1O15344 667 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 IRAK2O43187 625 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 RNASEH1O60930 286 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 RNASEH2AO75792 299 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 LUC7L3O95232 432 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 MOCS3O95396 460 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 CD59P13987 128 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 PDGFRAP16234 1089 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 ABCB4P21439 1286 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 MATKP42679 507 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 RNASE9P60153 205 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 RPS14P62263 151 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 YWHAZP63104 245 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 CDK17Q00537 523 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 IL9RQ01113 521 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 SEMA3BQ13214 749 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 TRIP6Q15654 476 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 EXOC3L4Q17RC7 722 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 HLA-BQ31612 363 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 POM121L1PQ3SYA9 428 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 MS4A13Q5J8X5 152 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 TAF3Q5VWG9 929 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 LRSAM1Q6UWE0 723 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 FAM183BPQ6ZVS7 135 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 ENOSF1Q7L5Y1 443 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 PIP4P1Q86T03 277 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 MMAAQ8IVH4 418 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 NAXDQ8IW45 347 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 APCDD1Q8J025 514 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 DEFB106AQ8N104 65 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.2
SPG11-213ENST00000558988 PNPLA1Q8N8W4 532 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 ATP6V0D2Q8N8Y2 350 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 FIBINQ8TAL6 211 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 MED15Q96RN5 788 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 CPXM1Q96SM3 734 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 OMDQ99983 421 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 TRIM62Q9BVG3 475 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 KLC2Q9H0B6 622 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 BTBD1Q9H0C5 482 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 POPDC2Q9HBU9 364 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 FBXL12Q9NXK8 326 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 APEX2Q9UBZ4 518 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 SERGEFQ9UGK8 458 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 SUN2Q9UH99 717 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 SLC12A6Q9UHW9 1150 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 SLCO3A1Q9UIG8 710 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 STOML2Q9UJZ1 356 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 DNAJC12Q9UKB3 198 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 INTS6Q9UL03 887 aaKnown RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 ERVW-1Q9UQF0 538 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 NCKAP1Q9Y2A7 1128 aa7.55□□□□□ -1.2
SPG11-213ENST00000558988 MUC22E2RYF6 1773 aaPredicted RBP7.55□□□□□ -1.2
SPG11-213ENST00000558988 ANKRD33BA6NCL7 494 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 GOLGA8SH3BPF8 625 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PLK4O00444 970 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 CER1O95813 267 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 IL1BP01584 269 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 ERBB2P04626 1255 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PROS1P07225 676 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 VAV1P15498 845 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PON1P27169 355 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 RDXP35241 583 aaKnown RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 KRT9P35527 623 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 RPS26P62854 115 aaKnown RBP7.54□□□□□ -1.2
SPG11-213ENST00000558988 FHL2Q14192 279 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 KIF19Q2TAC6 998 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 DPCR1Q3MIW9 517 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 ACCSLQ4AC99 568 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 PRAMEF14Q5SWL7 426 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 MPP7Q5T2T1 576 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 TMC3Q7Z5M5 1100 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 SLC47A2Q86VL8 602 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 STK40Q8N2I9 435 aa7.54□□□□□ -1.2
SPG11-213ENST00000558988 CADM4Q8NFZ8 388 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms