RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 NR2C2P49116 596 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 TMED10P49755 219 aaKnown RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 ESRRGP62508 458 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 DMPKQ09013 629 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 TRIM32Q13049 653 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SLC39A12Q504Y0 691 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 OVOS1Q6IE37 1185 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 FAM117BQ6P1L5 589 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 FAM47BQ8NA70 645 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SMG8Q8ND04 991 aaKnown RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 CNDP1Q96KN2 507 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SEPT5Q99719 369 aaPredicted RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 EBF1Q9UH73 591 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 CRYL1Q9Y2S2 319 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SHROOM3Q8TF72 1996 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 DOCK1Q14185 1865 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 GLTPD2A6NH11 291 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 ARL5CA6NH57 179 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 NCF1BA6NI72 391 aaPredicted RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 NCF1CA8MVU1 366 aaPredicted RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 ITGB1P05556 798 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 NCF1P14598 390 aaPredicted RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 GRK4P32298 578 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 EIF2B2P49770 351 aaKnown RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SLC18A1P54219 525 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 TSPY1Q01534 308 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 ZNF470Q6ECI4 717 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 KYAT3Q6YP21 454 aaKnown RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 MAVSQ7Z434 540 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 TAC4Q86UU9 113 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 EXOC2Q96KP1 924 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 COQ10BQ9H8M1 238 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SARS2Q9NP81 518 aaKnown RBP12.25□□□□□ -0.45
SEC11A-206ENST00000558924 SACM1LQ9NTJ5 587 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 XPR1Q9UBH6 696 aa12.25□□□□□ -0.45
SEC11A-206ENST00000558924 UBA6A0AVT1 1052 aaPredicted RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 GCATO75600 419 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 TFEBP19484 476 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 PTPN9P43378 593 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 CLEC6AQ6EIG7 209 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 TTC33Q6PID6 262 aaPredicted RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ZNF534Q76KX8 674 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 PSTKQ8IV42 348 aaKnown RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 TSPAN14Q8NG11 270 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 CYP2S1Q96SQ9 504 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ADNPQ9H2P0 1102 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 EFCAB1Q9HAE3 211 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 SLC2A6Q9UGQ3 507 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 PRKCGP05129 697 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 CPB1P15086 417 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 SH3BGRP55822 239 aaPredicted RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 GRM3Q14832 879 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ESRP1Q6NXG1 681 aaKnown RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 BBS5Q8N3I7 341 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 SHCBP1Q8NEM2 672 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 VPS39Q96JC1 886 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 HAUS8Q9BT25 410 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ARHGAP39Q9C0H5 1083 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 CNTN3Q9P232 1028 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ZDHHC2Q9UIJ5 367 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 DMTF1Q9Y222 760 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 A0A1W2PQ67 120 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 K7EPI3 171 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 NR5A2O00482 541 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 PIRO00625 290 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 GRK2P25098 689 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 GPR15P49685 360 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 PPP1R8Q12972 351 aaKnown RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 CAPRIN1Q14444 709 aaKnown RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 TEX44Q53QW1 395 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 POTEHQ6S545 545 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 C16orf89Q6UX73 402 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ATG14Q6ZNE5 492 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 Q6ZNX1 250 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 NT5DC4Q86YG4 428 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ZDHHC17Q8IUH5 632 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 ATAD1Q8NBU5 361 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 GABPB2Q8TAK5 448 aaPredicted RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 BLOC1S5Q8TDH9 187 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 DQX1Q8TE96 717 aaKnown RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 CDH19Q9H159 772 aa12.24□□□□□ -0.45
SEC11A-206ENST00000558924 KIAA0100Q14667 2235 aaKnown RBP12.24□□□□□ -0.45
SEC11A-206ENST00000558924 SMIM35A0A1B0GVV1 85 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 H3BNX3 289 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PCSK1P29120 753 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 DAOAP59103 153 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 PFKPQ01813 784 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 CARTPTQ16568 116 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 MGAT5BQ3V5L5 792 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 STRADAQ7RTN6 431 aa12.23□□□□□ -0.45
SEC11A-206ENST00000558924 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
SEC11A-206ENST00000558924 TRMT13Q9NUP7 481 aaKnown RBP12.23□□□□□ -0.45
SEC11A-206ENST00000558924 EMCNQ9ULC0 261 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 207 ms