RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 LPAL2Q16609 132 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 PLK5Q496M5 336 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 PMS2CLQ68D20 193 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 ITPRIPL1Q6GPH6 555 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 BRAT1Q6PJG6 821 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 ARMCX6Q7L4S7 300 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 PRPF39Q86UA1 669 aaKnown RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 TMEFF1Q8IYR6 380 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 HCAR2Q8TDS4 363 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 TDRD1Q9BXT4 1180 aaKnown RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 DUSP15Q9H1R2 295 aaPredicted RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 GBA3Q9H227 469 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 EPC1Q9H2F5 836 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 C6orf106Q9H6K1 298 aaPredicted RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 UBP1Q9NZI7 540 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 GGT7Q9UJ14 662 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 ITM2BQ9Y287 266 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 PCDHB9Q9Y5E1 797 aa17.59■□□□□ 0.41
TPM1-214ENST00000558544 TP53BP1Q12888 1972 aaPredicted RBP17.59■□□□□ 0.41
TPM1-214ENST00000558544 C5orf60A6NFR6 353 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 LRRC72A6NJI9 287 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 UPK3BL1B0FP48 263 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 UPK3BL2E5RIL1 263 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 PGLSO95336 258 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 MT-CYBP00156 380 aaPredicted RBP17.58■□□□□ 0.4
TPM1-214ENST00000558544 CPP00450 1065 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 PRKCGP05129 697 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 ITGAVP06756 1048 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 ITIH2P19823 946 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 NBL1P41271 181 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 KCNJ1P48048 391 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 UGP2Q16851 508 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 ARMC12Q5T9G4 340 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 DRICH1Q6PGQ1 229 aaPredicted RBP17.58■□□□□ 0.4
TPM1-214ENST00000558544 LPCAT2Q7L5N7 544 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 TTC7BQ86TV6 843 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 CREG2Q8IUH2 290 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 OR2T34Q8NGX1 318 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 FCRL5Q96RD9 977 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 HOMER3Q9NSC5 361 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 FADS3Q9Y5Q0 445 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 FRYLO94915 3013 aa17.58■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3DA0A087WVF3 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3IA0A087WXS9 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3EA0A087X179 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3KA0A087X1G2 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3FA6NER0 549 aaPredicted RBP17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3LB9A6J9 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 SPINT1O43278 529 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 OPHN1O60890 802 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 IFNB1P01574 187 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 PDHA1P08559 390 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3HP0C7X1 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 CA4P22748 312 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 PSMB4P28070 264 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 DHPSP49366 369 aaPredicted RBP17.57■□□□□ 0.4
TPM1-214ENST00000558544 ELF2Q15723 593 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 PCSK7Q16549 785 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3GQ6DHY5 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3CQ6IPX1 549 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 ARHGEF18Q6ZSZ5 1173 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 PRUNE1Q86TP1 453 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 SLC41A1Q8IVJ1 513 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 TBC1D3Q8IZP1 549 aaPredicted RBP17.57■□□□□ 0.4
TPM1-214ENST00000558544 RAB7BQ96AH8 199 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 RTP4Q96DX8 246 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 OXNAD1Q96HP4 312 aaPredicted RBP17.57■□□□□ 0.4
TPM1-214ENST00000558544 ZC3H10Q96K80 434 aaKnown RBP17.57■□□□□ 0.4
TPM1-214ENST00000558544 HSPA12BQ96MM6 686 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 GORASP1Q9BQQ3 440 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 PCDH9Q9HC56 1237 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 SMG5Q9UPR3 1016 aaKnown RBP17.57■□□□□ 0.4
TPM1-214ENST00000558544 CHKBQ9Y259 395 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 MYLKQ15746 1914 aa17.57■□□□□ 0.4
TPM1-214ENST00000558544 GOLGA6L10A0A0M3HER8 536 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 A0A1W2PQ67 120 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 FZD6O60353 706 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 PHF2O75151 1096 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 PMPCBO75439 489 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 GCATO75600 419 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 RHOBTB1O94844 696 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 FSBPO95073 299 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 PCDH8O95206 1070 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 ETS1P14921 441 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 STIP1P31948 543 aaKnown RBP17.56■□□□□ 0.4
TPM1-214ENST00000558544 PTGER3P43115 390 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 PPP2CBP62714 309 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 POLR2LP62875 67 aaKnown RBP17.56■□□□□ 0.4
TPM1-214ENST00000558544 PPP2CAP67775 309 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 SEMG2Q02383 582 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 SLC14A2Q15849 920 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 CYP1B1Q16678 543 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 P3H1Q32P28 736 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 TTC27Q6P3X3 843 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 KDELC2Q7Z4H8 507 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 TAB3Q8N5C8 712 aaPredicted RBP17.56■□□□□ 0.4
TPM1-214ENST00000558544 CCDC89Q8N998 374 aa17.56■□□□□ 0.4
TPM1-214ENST00000558544 C12orf50Q8NA57 414 aaPredicted RBP17.56■□□□□ 0.4
TPM1-214ENST00000558544 MAGOHBQ96A72 148 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms