RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 AMACRQ9UHK6 382 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 ITM2BQ9Y287 266 aa12.48□□□□□ -0.41
SMAD3-205ENST00000558428 TP53BP1Q12888 1972 aaPredicted RBP12.48□□□□□ -0.41
SMAD3-205ENST00000558428 CABIN1Q9Y6J0 2220 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 LRRK1Q38SD2 2015 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 PCDH15Q96QU1 1955 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 LNP1A1A4G5 178 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 TSPAN11A1L157 253 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 UPK3BL1B0FP48 263 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 UPK3BL2E5RIL1 263 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 APOC4-APOC2K7ER74 178 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 TSPAN6O43657 245 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 GDF9O60383 454 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 JCHAINP01591 159 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 APOC2P02655 101 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 HLA-DQB2P05538 268 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 TIMP2P16035 220 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 PTPN7P35236 360 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 NUDT1P36639 197 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 AFF3P51826 1226 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 RPS21P63220 83 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ZNF211Q13398 564 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 SETMARQ53H47 684 aaPredicted RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 RALGPS1Q5JS13 557 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 SEL1L3Q68CR1 1132 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 KIAA1161Q6NSJ0 714 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ADAT2Q7Z6V5 191 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ZC3H18Q86VM9 953 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ZSWIM9Q86XI8 627 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 PDCD6IPQ8WUM4 868 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 TFB1MQ8WVM0 346 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 KLK6Q92876 244 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 HES6Q96HZ4 224 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 SERAC1Q96JX3 654 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 NSMCE3Q96MG7 304 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 SLC6A18Q96N87 628 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 IL12RB2Q99665 862 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 KCNF1Q9H3M0 494 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 AASDHPPTQ9NRN7 309 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 RXFP3Q9NSD7 469 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 GGT7Q9UJ14 662 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ZFR2Q9UPR6 939 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 EFR3BQ9Y2G0 817 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 PCDHGC4Q9Y5F7 938 aa12.47□□□□□ -0.41
SMAD3-205ENST00000558428 ASCC3Q8N3C0 2202 aaKnown RBP12.47□□□□□ -0.41
SMAD3-205ENST00000558428 TRAFD1O14545 582 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 AREL1O15033 823 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 SLC31A1O15431 190 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 SPINT1O43278 529 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 SOCS5O75159 536 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 TJP3O95049 919 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 SYPP08247 313 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 PRLRP16471 622 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ENGP17813 658 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ITIH2P19823 946 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 CSNK1EP49674 416 aaKnown RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 SUOXP51687 545 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ATXN3P54252 364 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 RACK1P63244 317 aaKnown RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 IFI35P80217 286 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ARHGAP8P85298 464 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 DSC2Q02487 901 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ELP6Q0PNE2 266 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ZBTB17Q13105 803 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 PRKD1Q15139 912 aaPredicted RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 TEAD4Q15561 434 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 UGP2Q16851 508 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ZNF284Q2VY69 593 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 NAPEPLDQ6IQ20 393 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ERAP2Q6P179 960 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 CXorf40AQ8TE69 158 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ECHDC3Q96DC8 303 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 HERPUD2Q9BSE4 406 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 GTPBP2Q9BX10 602 aaKnown RBP12.46□□□□□ -0.41
SMAD3-205ENST00000558428 CEP41Q9BYV8 373 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 PCDH12Q9NPG4 1184 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 DMTF1Q9Y222 760 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
SMAD3-205ENST00000558428 TMEM131Q92545 1883 aa12.46□□□□□ -0.42
SMAD3-205ENST00000558428 SPTBN4Q9H254 2564 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 A0A1B0GVT2 93 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 A0A1W2PQ67 120 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 HACD1B0YJ81 288 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 H7C0C1 242 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 HTRA2O43464 458 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-205ENST00000558428 CPP00450 1065 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 PRKCGP05129 697 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 CES1P23141 567 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 ATP5OP48047 213 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 GRIA4P48058 902 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 POLR2LP62875 67 aaKnown RBP12.45□□□□□ -0.42
SMAD3-205ENST00000558428 TRAF2Q12933 501 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 GRIK2Q13002 908 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 NOMO1Q15155 1222 aa12.45□□□□□ -0.42
SMAD3-205ENST00000558428 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms