RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 UGP2Q16851 508 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 TMEM52BQ4KMG9 183 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 CCDC183Q5T5S1 534 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ERMARDQ5T6L9 678 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 LVRNQ6Q4G3 990 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 MACC1Q6ZN28 852 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 EFL1Q7Z2Z2 1120 aaKnown RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 IRF2BP2Q7Z5L9 587 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 PHACTR4Q8IZ21 702 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 FSTL5Q8N475 847 aaPredicted RBP13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 TUBGCP5Q96RT8 1024 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 LGMNQ99538 433 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 THSD1Q9NS62 852 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 KLF15Q9UIH9 416 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 PCDHB1Q9Y5F3 818 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 ASXL3Q9C0F0 2248 aa13.75□□□□□ -0.21
SNRPA1-204ENST00000558020 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 EEF2KO00418 725 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 LZTS3O60299 673 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 TCEA3O75764 348 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 PALMO75781 387 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 DXOO77932 396 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 MPOP05164 745 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 PSMA2P25787 234 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 SERPINA4P29622 427 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 CSNK1DP48730 415 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 ZNF135P52742 658 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 UCNP55089 124 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 GABREP78334 506 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 CCDC173Q0VFZ6 552 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 MAMLD1Q13495 774 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 CYTH1Q15438 398 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 ISXQ2M1V0 245 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 LRRC73Q5JTD7 316 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 RBM44Q6ZP01 1051 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 GPR155Q7Z3F1 870 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 PSTKQ8IV42 348 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 LSM14AQ8ND56 463 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 FCRL3Q96P31 734 aaPredicted RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 BOCQ9BWV1 1114 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 KLC2Q9H0B6 622 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 DHX35Q9H5Z1 703 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 PRORYQ9H606 182 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 LRRC19Q9H756 370 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 AP4E1Q9UPM8 1137 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 FASNP49327 2511 aaKnown RBP13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 LOC400499M0QZD8 3231 aa13.74□□□□□ -0.21
SNRPA1-204ENST00000558020 LY6G6EA0A0G2JKS1 128 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 TEX51A0A1B0GUA7 166 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 CFAP69A5D8W1 941 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 TMCO5BA8MYB1 307 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 MUSKO15146 869 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 YY2O15391 372 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 PRAMEF11O60813 436 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 GCATO75600 419 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 RASGRP1O95267 797 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 GZMAP12544 262 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 IGFALSP35858 605 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 PAPOLAP51003 745 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 HK3P52790 923 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 NSUN2Q08J23 767 aaKnown RBP eCLIP13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 C1orf61Q13536 156 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 RFTN1Q14699 578 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 C6orf132Q5T0Z8 1188 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 GUSBP11Q6P575 273 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 SRLQ86TD4 932 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 HID1Q8IV36 788 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 AOPEPQ8N6M6 819 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 TP53I13Q8NBR0 393 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 VOPP1Q96AW1 172 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 EXOC2Q96KP1 924 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 DPH1Q9BZG8 443 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 PCDH12Q9NPG4 1184 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 MBNL1Q9NR56 388 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 LHX3Q9UBR4 397 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 PADI4Q9UM07 663 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 U3KQA8 63 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 BPTFQ12830 3046 aa13.73□□□□□ -0.21
SNRPA1-204ENST00000558020 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TMX2-CTNND1H3BSU7 103 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 J3KR12 359 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 INSIG1O15503 277 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 FTLP02792 175 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TSHRP16473 764 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 ITIH2P19823 946 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TGM2P21980 687 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 NFKBIAP25963 317 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 HCAR3P49019 387 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 LIG3P49916 1009 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 RENBPP51606 427 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 TLE3Q04726 772 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 BCL2L1Q07817 233 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 C19orf57Q0VDD7 668 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 INPP5AQ14642 412 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 NCAPHQ15003 741 aa13.72□□□□□ -0.21
SNRPA1-204ENST00000558020 AGERQ15109 404 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms