RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 GLIS1Q8NBF1 620 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 SPATA4Q8NEY3 305 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 SLC35B2Q8TB61 432 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 ACTL9Q8TC94 416 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 C1orf54Q8WWF1 131 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 FGF14Q92915 247 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 SMARCD2Q92925 531 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 RNF34Q969K3 372 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 TBC1D31Q96DN5 1066 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 ZNF419Q96HQ0 510 aaPredicted RBP6.09□□□□□ -1.43
FOXN3-218ENST00000557718 ZFYVE19Q96K21 471 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 LMLNQ96KR4 655 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 RPP25Q9BUL9 199 aaKnown RBP6.09□□□□□ -1.43
FOXN3-218ENST00000557718 G6PC3Q9BUM1 346 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 DCLK3Q9C098 648 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 NACA2Q9H009 215 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 DDX47Q9H0S4 455 aaKnown RBP6.09□□□□□ -1.43
FOXN3-218ENST00000557718 LINC00597Q9H2U6 94 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 SLITRK6Q9H5Y7 841 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 GCM1Q9NP62 436 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 HPS4Q9NQG7 708 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 DTLQ9NZJ0 730 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 PPARGC1AQ9UBK2 798 aaKnown RBP6.09□□□□□ -1.43
FOXN3-218ENST00000557718 CD207Q9UJ71 328 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 DNPEPQ9ULA0 475 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 EFR3BQ9Y2G0 817 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 NEU2Q9Y3R4 380 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 WNT6Q9Y6F9 365 aa6.09□□□□□ -1.43
FOXN3-218ENST00000557718 ZFP37Q9Y6Q3 630 aaPredicted RBP6.09□□□□□ -1.43
FOXN3-218ENST00000557718 TP53BP1Q12888 1972 aaPredicted RBP6.09□□□□□ -1.43
FOXN3-218ENST00000557718 PLXNA2O75051 1894 aa6.09□□□□□ -1.44
FOXN3-218ENST00000557718 NUMA1Q14980 2115 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 HEPACAM2A8MVW5 462 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 F5H5T6 163 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ARNTLO00327 626 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 KRIT1O00522 736 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 APOL1O14791 398 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 LIASO43766 372 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 PHF2O75151 1096 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 CYP17A1P05093 508 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 LAMP2P13473 410 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ARSAP15289 507 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 DESP17661 470 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TGM2P21980 687 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 SP100P23497 879 aaPredicted RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 HOXD9P28356 352 aaPredicted RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 EPHB2P29323 1055 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ACVRL1P37023 503 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 AVPR1AP37288 418 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ARL4AP40617 200 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 KCNJ1P48048 391 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 HARS2P49590 506 aaKnown RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 GALNT2Q10471 571 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 SMAD4Q13485 552 aaKnown RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 HTR4Q13639 388 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TUBB2AQ13885 445 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 MPP2Q14168 576 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 FSCBQ5H9T9 825 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ATAT1Q5SQI0 421 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 SNAP47Q5SQN1 464 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ZFYVE27Q5T4F4 411 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 NAIF1Q69YI7 327 aaPredicted RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TRIM68Q6AZZ1 485 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 CES5AQ6NT32 575 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 C1orf228Q6PIY5 440 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 RHBDF2Q6PJF5 856 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 PARM1Q6UWI2 310 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 DNAJC14Q6Y2X3 702 aaPredicted RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ARHGAP36Q6ZRI8 547 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 EP400NLQ6ZTU2 488 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 REC114Q7Z4M0 266 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TFAP2DQ7Z6R9 452 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TMEM25Q86YD3 366 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 CELF5Q8N6W0 485 aaKnown RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 GOLM1Q8NBJ4 401 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 FBXO27Q8NI29 283 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 DEPDC1BQ8WUY9 529 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 PPM1EQ8WY54 764 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 NKD2Q969F2 451 aaPredicted RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ALG14Q96F25 216 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 CELF6Q96J87 481 aaKnown RBP6.08□□□□□ -1.44
FOXN3-218ENST00000557718 KXD1Q9BQD3 176 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TUBB2BQ9BVA1 445 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 SGPP1Q9BX95 441 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ZYG11BQ9C0D3 744 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 SLC39A8Q9C0K1 460 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 EPC1Q9H2F5 836 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 LRRC19Q9H756 370 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 KIF9Q9HAQ2 790 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 TMEM248Q9NWD8 314 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 GDE1Q9NZC3 331 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 EPS15L1Q9UBC2 864 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 RNF14Q9UBS8 474 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ZMYM5Q9UJ78 669 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 SH3BP1Q9Y3L3 701 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 PIKFYVEQ9Y2I7 2098 aa6.08□□□□□ -1.44
FOXN3-218ENST00000557718 ANTXRLA6NF34 631 aa6.07□□□□□ -1.44
FOXN3-218ENST00000557718 ZSCAN5CA6NGD5 496 aaPredicted RBP6.07□□□□□ -1.44
FOXN3-218ENST00000557718 C2CD4DB7Z1M9 353 aa6.07□□□□□ -1.44
FOXN3-218ENST00000557718 ANHXE9PGG2 379 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms