RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 RNF14Q9UBS8 474 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 SERGEFQ9UGK8 458 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 FEZ2Q9UHY8 353 aaPredicted RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PILRBQ9UKJ0 227 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 DRG1Q9Y295 367 aaKnown RBP13.81□□□□□ -0.2
SHMT2-234ENST00000557703 GVINP1Q7Z2Y8 2422 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 PI4KAP42356 2102 aa13.81□□□□□ -0.2
SHMT2-234ENST00000557703 MYO15AQ9UKN7 3530 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TRPM6Q9BX84 2022 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 WDR87Q6ZQQ6 2873 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 A0A1W2PPC4 97 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 GOLGA6CA6NDK9 693 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 GOLGA6BA6NDN3 693 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 C5orf60A6NFR6 353 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 MEI4A8MW99 385 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 NEMP1O14524 444 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TOR1BO14657 336 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 MAGEC1O60732 1142 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 ANXA9O76027 345 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 MAP3K6O95382 1288 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 HLA-DQB2P05538 268 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 GOLGA6DP0CG33 693 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TIMP2P16035 220 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 PLA2G5P39877 138 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TNNT3P45378 269 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-234ENST00000557703 DHPSP49366 369 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TAS2R38P59533 333 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 RACK1P63244 317 aaKnown RBP13.8□□□□□ -0.2
SHMT2-234ENST00000557703 LMNB2Q03252 620 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 WASHC5Q12768 1159 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 AGERQ15109 404 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 DUOXA1Q1HG43 343 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TMEM52BQ4KMG9 183 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 PLA2G2CQ5R387 149 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 PID1Q7Z2X4 250 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 FAM124AQ86V42 546 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 IQCHQ86VS3 1027 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 HORMAD1Q86X24 394 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 CACUL1Q86Y37 369 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 CNTD1Q8N815 330 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 OR6K2Q8NGY2 324 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 ACTRT1Q8TDG2 376 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TADA1Q96BN2 335 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 TRIM44Q96DX7 344 aaPredicted RBP13.8□□□□□ -0.2
SHMT2-234ENST00000557703 RTP4Q96DX8 246 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 ERLEC1Q96DZ1 483 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 SCRN2Q96FV2 425 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 HSPA12BQ96MM6 686 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 FCRL5Q96RD9 977 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 ZDHHC5Q9C0B5 715 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 USP29Q9HBJ7 922 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 GLOD4Q9HC38 313 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 FAM86C1Q9NVL1 165 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 GOLGA6AQ9NYA3 693 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 PYCARDQ9ULZ3 195 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 SNX12Q9UMY4 172 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 AAR2Q9Y312 384 aaKnown RBP13.8□□□□□ -0.2
SHMT2-234ENST00000557703 CEP192Q8TEP8 1941 aa13.8□□□□□ -0.2
SHMT2-234ENST00000557703 KNL1Q8NG31 2342 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 A0A1B0GTW7 788 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PSMD11O00231 422 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 RNF103O00237 685 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 RIOK3O14730 519 aaKnown RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 CEP104O60308 925 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 FZD6O60353 706 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 GCATO75600 419 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PCDH8O95206 1070 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PGLSO95336 258 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 FGGP02679 453 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 ITGAVP06756 1048 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 ZNF806P0C7X5 589 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 CYP2A6P11509 494 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 ACTN2P35609 894 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PTGER3P43115 390 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 GNG11P61952 73 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 ZBTB17Q13105 803 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 MPP3Q13368 585 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 LLGL1Q15334 1064 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 CSRP2Q16527 193 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PAPD7Q5XG87 772 aaKnown RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 CCDC70Q6NSX1 233 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 SLC23A3Q6PIS1 610 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 USP45Q70EL2 814 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 SLC41A1Q8IVJ1 513 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 SLC35F6Q8N357 371 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PAF1Q8N7H5 531 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 FRMD1Q8N878 549 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 DENND6BQ8NEG7 585 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 BIRC7Q96CA5 298 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 AGAP3Q96P47 875 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 LENG8Q96PV6 779 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 LYSMD1Q96S90 227 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 HERPUD2Q9BSE4 406 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 TDRD1Q9BXT4 1180 aaKnown RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 C6orf106Q9H6K1 298 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 SEPT10Q9P0V9 454 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
SHMT2-234ENST00000557703 FAM153AQ9UHL3 310 aa13.79□□□□□ -0.2
SHMT2-234ENST00000557703 PCDHGC4Q9Y5F7 938 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms