RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 GAGE1Q13065 139 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GAGE4Q13068 117 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 BAATQ14032 418 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PDE1CQ14123 709 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 LPIN1Q14693 890 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 INPP5JQ15735 1006 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 LEXMQ3ZCV2 418 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SYTL3Q4VX76 610 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SLC9B1Q4ZJI4 515 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 AWAT1Q58HT5 328 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF667Q5HYK9 610 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 HEPHL1Q6MZM0 1159 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PDXDC1Q6P996 788 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 CYP20A1Q6UW02 462 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 C16orf54Q6UWD8 224 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 FAM160B2Q86V87 743 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 DENND6AQ8IWF6 608 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ADGRF2Q8IZF7 708 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 CNTROBQ8N137 903 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ANKRD52Q8NB46 1076 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 GABPB2Q8TAK5 448 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 POMGNT1Q8WZA1 660 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 FBXL8Q96CD0 374 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 LBHD1Q9BQE6 289 aaPredicted RBP1.8□□□□□ -2.12
HIF1A-212ENST00000557538 C1QTNF1Q9BXJ1 281 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 MROH8Q9H579 483 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 PDGFCQ9NRA1 345 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 SMYD2Q9NRG4 433 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 NDRG3Q9UGV2 375 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ACAD8Q9UKU7 415 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ARHGAP26Q9UNA1 814 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 ADAM18Q9Y3Q7 739 aa1.8□□□□□ -2.12
HIF1A-212ENST00000557538 RHODO00212 210 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MOSPD3O75425 235 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 EIF2S1P05198 315 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 GALTP07902 379 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PRR35P0CG20 571 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 EPHB2P29323 1055 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 POLD2P49005 469 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CLK1P49759 484 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MAMLD1Q13495 774 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ENTPD8Q5MY95 495 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 GPATCH4Q5T3I0 446 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 FAM69AQ5T7M9 428 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PARM1Q6UWI2 310 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CAMK1DQ8IU85 385 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 EPHX4Q8IUS5 362 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ARHGAP12Q8IWW6 846 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 C1orf131Q8NDD1 294 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PSPC1Q8WXF1 523 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 KCNJ9Q92806 393 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CUL5Q93034 780 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 LRRC59Q96AG4 307 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ZG16BQ96DA0 208 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PPP1R13BQ96KQ4 1090 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MRPL1Q9BYD6 325 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SYNCQ9H7C4 482 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 WDR6Q9NNW5 1121 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ZBTB40Q9NUA8 1239 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 HAO1Q9UJM8 370 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 INTS6Q9UL03 887 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PCDHGB5Q9Y5G0 923 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 A3GALT2U3KPV4 340 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 TCRBV7S3A2A0A539 114 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MANSC4A6NHS7 340 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 FAM90A8PA6NJQ4 464 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 LRRC53A6NM62 1247 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CEP104O60308 925 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 RNASEH2AO75792 299 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 FAM90A13PP0C7W8 464 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 FAM90A24PP0C7X0 464 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SHMT1P34896 483 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 RGS2P41220 211 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CPA2P48052 419 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PGGT1BP53609 377 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 DRG2P55039 364 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PMPCAQ10713 525 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CSTF3Q12996 717 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 GALNT3Q14435 633 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 EZH2Q15910 746 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SMTNL2Q2TAL5 461 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 DPCR1Q3MIW9 517 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 EFHC1Q5JVL4 640 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 C8orf82Q6P1X6 216 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 PRPF39Q86UA1 669 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ZNF575Q86XF7 245 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CADM3Q8N126 398 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 DPP10Q8N608 796 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 ENGASEQ8NFI3 743 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 IP6K1Q92551 441 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 TTC14Q96N46 770 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 WDR77Q9BQA1 342 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 MMTAG2Q9BU76 263 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 RSPH9Q9H1X1 276 aaPredicted RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CCDC68Q9H2F9 335 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SNTG1Q9NSN8 517 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 HCFC1R1Q9NWW0 138 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 DLGAP2Q9P1A6 1054 aa1.79□□□□□ -2.12
HIF1A-212ENST00000557538 SEC63Q9UGP8 760 aaKnown RBP1.79□□□□□ -2.12
HIF1A-212ENST00000557538 CAPN7Q9Y6W3 813 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms