RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 PPARDQ03181 441 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 CCDC173Q0VFZ6 552 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 MAMLD1Q13495 774 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 C1orf61Q13536 156 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 NR0B2Q15466 257 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 UGP2Q16851 508 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 ISXQ2M1V0 245 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 GUSBP11Q6P575 273 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 EFL1Q7Z2Z2 1120 aaKnown RBP16.05■□□□□ 0.16
TUBB3-213ENST00000557262 GRAMD1AQ96CP6 724 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 ZNF641Q96N77 438 aaPredicted RBP16.05■□□□□ 0.16
TUBB3-213ENST00000557262 EIF3CQ99613 913 aaKnown RBP16.05■□□□□ 0.16
TUBB3-213ENST00000557262 SYT11Q9BT88 431 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 BOCQ9BWV1 1114 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 LRRC19Q9H756 370 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 POLR1BQ9H9Y6 1135 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 PARVAQ9NVD7 372 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 TAS2R14Q9NYV8 317 aa16.05■□□□□ 0.16
TUBB3-213ENST00000557262 PNMA8BQ9ULN7 279 aaPredicted RBP16.05■□□□□ 0.16
TUBB3-213ENST00000557262 TSPAN11A1L157 253 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 LMO7DNF2Z398 122 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 J3KR12 359 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 YY2O15391 372 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 TEX33O43247 280 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 LZTS3O60299 673 aaPredicted RBP16.04■□□□□ 0.16
TUBB3-213ENST00000557262 PRAMEF11O60813 436 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 DXOO77932 396 aaKnown RBP16.04■□□□□ 0.16
TUBB3-213ENST00000557262 PIGNO95427 931 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 ATP1A3P13637 1013 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 CSNK1DP48730 415 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 BLKP51451 505 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 GABREP78334 506 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 LRRC14Q15048 493 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 ERMARDQ5T6L9 678 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 PLEKHA7Q6IQ23 1121 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 MACC1Q6ZN28 852 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 ZNF248Q8NDW4 579 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 EXOC2Q96KP1 924 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 SLC39A8Q9C0K1 460 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 CLPBQ9H078 707 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 DHX35Q9H5Z1 703 aaKnown RBP16.04■□□□□ 0.16
TUBB3-213ENST00000557262 PDFQ9HBH1 243 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 GPATCH2LQ9NWQ4 482 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 AP4E1Q9UPM8 1137 aa16.04■□□□□ 0.16
TUBB3-213ENST00000557262 ARHGAP42A6NI28 874 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 TMCO5BA8MYB1 307 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 EEF2KO00418 725 aaKnown RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 MUSKO15146 869 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 DAPK3O43293 454 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 BUB1BO60566 1050 aaPredicted RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 TSHRP16473 764 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 PSMA2P25787 234 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 PAPOLAP51003 745 aaKnown RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 ERVPABLB-1P60509 514 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 TLE3Q04726 772 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 IRF4Q15306 451 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 WSCD2Q2TBF2 565 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 C6orf132Q5T0Z8 1188 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 CCDC183Q5T5S1 534 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 ESRP1Q6NXG1 681 aaKnown RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 ERAP2Q6P179 960 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 BRAT1Q6PJG6 821 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 SRLQ86TD4 932 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 SPACA3Q8IXA5 215 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 FSTL5Q8N475 847 aaPredicted RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 AOPEPQ8N6M6 819 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 NAT6Q93015 286 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 CELF6Q96J87 481 aaKnown RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 HIC2Q96JB3 615 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 FCRL3Q96P31 734 aaPredicted RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 TUBGCP5Q96RT8 1024 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 LGMNQ99538 433 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 LRRC61Q9BV99 259 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 NAT10Q9H0A0 1025 aaKnown RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 PCDH12Q9NPG4 1184 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
TUBB3-213ENST00000557262 COQ6Q9Y2Z9 468 aa16.03■□□□□ 0.16
TUBB3-213ENST00000557262 TMEM191CA6NGB0 347 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 TK2O00142 265 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 PALMO75781 387 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 RNF8O76064 485 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 CTSEP14091 401 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 HTR1BP28222 390 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 HK3P52790 923 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 PCBP4P57723 403 aaKnown RBP16.02■□□□□ 0.16
TUBB3-213ENST00000557262 INPP5AQ14642 412 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 AGERQ15109 404 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 ELOCQ15369 112 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 CA9Q16790 459 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 PERM1Q5SV97 790 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 CFAP58Q5T655 872 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 LVRNQ6Q4G3 990 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 GPR155Q7Z3F1 870 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 CAMK1DQ8IU85 385 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 HID1Q8IV36 788 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 SLC35F3Q8IY50 421 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 SDR16C5Q8N3Y7 309 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 WDR48Q8TAF3 677 aa16.02■□□□□ 0.16
TUBB3-213ENST00000557262 SCG3Q8WXD2 468 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms