RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 TBKBP1A7MCY6 615 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 A8MX80 341 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PLIN3O60664 434 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NBNO60934 754 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SH3BGRLO75368 114 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FBXO21O94952 628 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CHRNA4P43681 627 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SLC18A2Q05940 514 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 RUNX1T1Q06455 604 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SEMA5AQ13591 1074 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DNASE1L3Q13609 305 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SNX17Q15036 470 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PYDC2Q56P42 97 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ARL13AQ5H913 290 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ARMC4Q5T2S8 1044 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NBPF12Q5TAG4 269 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GLT6D1Q7Z4J2 308 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C11orf96Q7Z7L8 435 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 STX19Q8N4C7 294 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 OR52K2Q8NGK3 314 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 BHMTQ93088 406 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 OSMRQ99650 979 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HERPUD2Q9BSE4 406 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 KCNK13Q9HB14 408 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FADS3Q9Y5Q0 445 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HEMK1Q9Y5R4 338 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MYH4Q9Y623 1939 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 IQCA1LA6NCM1 817 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TMEM247A6NEH6 219 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SLC15A5A6NIM6 579 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FAM159BA6NKW6 160 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 J3QRK9 145 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FFAR3O14843 346 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GPR42O15529 346 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DYNC1LI2O43237 492 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CILPO75339 1184 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 H6PDO95479 791 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NADKO95544 446 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SERPIND1P05546 499 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FGF3P11487 239 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HGFP14210 728 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DPEP1P16444 411 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 LBPP18428 481 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TFEBP19484 476 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SERPINH1P50454 418 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CDK9P50750 372 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 LAPTM5Q13571 262 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PAGE2BQ5JRK9 111 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DGKKQ5KSL6 1271 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FBXO47Q5MNV8 452 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 OR52E8Q6IFG1 317 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FAM45BPQ6NSW5 357 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SPESP1Q6UW49 350 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NCCRP1Q6ZVX7 275 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CENPSQ8N2Z9 138 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C19orf18Q8NEA5 215 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FAM45AQ8TCE6 357 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MCOLN3Q8TDD5 553 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CLEC4DQ8WXI8 215 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C12orf43Q96C57 262 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 FBXL8Q96CD0 374 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SLC39A3Q9BRY0 314 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GPR63Q9BZJ6 419 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ULBP1Q9BZM6 244 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 DEFB129Q9H1M3 183 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GBA3Q9H227 469 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 LATS2Q9NRM7 1088 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SACM1LQ9NTJ5 587 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 INTS10Q9NVR2 710 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MAP10Q9P2G4 905 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HES2Q9Y543 173 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GMPPBQ9Y5P6 360 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 COPG1Q9Y678 874 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ADAMTSL3P82987 1691 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ALS2Q96Q42 1657 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PAPPAQ13219 1627 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 A0A0J9YVX5 310 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TTC24A2A3L6 582 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 SOCS2O14508 198 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CHRM1P11229 460 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 INSRRP14616 1297 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GM2AP17900 193 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 POLR2JP52435 117 aaKnown RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 MAXP61244 160 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NRG1Q02297 640 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ZNF284Q2VY69 593 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C6orf183Q5T699 404 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 HECTD2Q5U5R9 776 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 GCNT7Q6ZNI0 430 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C16orf59Q7L2K0 433 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ANKRD23Q86SG2 305 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 ZNF605Q86T29 641 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TMEM132CQ8N3T6 1108 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 TTC30BQ8N4P2 665 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NIPA2Q8N8Q9 360 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 C18orf25Q96B23 403 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-223ENST00000557005 PGLYRP2Q96PD5 576 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 NAT9Q9BTE0 207 aa5.01□□□□□ -1.61
SYNE2-223ENST00000557005 CDT1Q9H211 546 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms