RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TCRBV3S1A0A5B6 114 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 TMX2-CTNND1H3BSU7 103 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 TPST1O60507 370 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 GPR32O75388 356 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 SNRPB2P08579 225 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 ATP5F1P24539 256 aaPredicted RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 LRPAP1P30533 357 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 SLC7A1P30825 629 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ALDH3B2P48448 385 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 YBX1P67809 324 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 PRKCQQ04759 706 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 LPIN1Q14693 890 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 UGP2Q16851 508 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 DENND5AQ6IQ26 1287 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 KLHL35Q6PF15 583 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 LINC00523Q86TU6 105 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CPNE9Q8IYJ1 553 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 FIBCD1Q8N539 461 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ARRDC4Q8NCT1 418 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 TMEM40Q8WWA1 233 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ITFG2Q969R8 447 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 NTAN1Q96AB6 310 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 SLC9A7Q96T83 725 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 OLFM1Q99784 485 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 SMOQ99835 787 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 DCUN1D5Q9BTE7 237 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 IGSF5Q9NSI5 407 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CD300AQ9UGN4 299 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 CROTQ9UKG9 612 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 TDRKHQ9Y2W6 561 aaKnown RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 MTF2Q9Y483 593 aaPredicted RBP11.48□□□□□ -0.57
SRP54-213ENST00000556994 NRCAMQ92823 1304 aa11.48□□□□□ -0.57
SRP54-213ENST00000556994 ASB14A6NK59 587 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 A8MT66 165 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 MTSS1O43312 755 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CLIC3O95833 236 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 SOX11P35716 441 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CD151P48509 253 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 SCAPQ12770 1279 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 SQLEQ14534 574 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 SV2CQ496J9 727 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 NHSL2Q5HYW2 709 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 BTBD8Q5XKL5 378 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 DHFR2Q86XF0 187 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CLVS1Q8IUQ0 354 aaPredicted RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 KCTD13Q8WZ19 329 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 DPF3Q92784 378 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 TRIM8Q9BZR9 551 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CRTAC1Q9NQ79 661 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 PNPLA3Q9NST1 481 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CHCHD3Q9NX63 227 aaKnown RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 RRN3Q9NYV6 651 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 GIMAP2Q9UG22 337 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 EGFL7Q9UHF1 273 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 MYBPHLA2RUH7 354 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 UBFD1O14562 309 aaKnown RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 NRP2O60462 931 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 SRP72O76094 671 aaKnown RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 COL1A2P08123 1366 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CCDC166P0CW27 439 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CPB1P15086 417 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 ATP6V1B2P21281 511 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 PSMD8P48556 350 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 HCAR3P49019 387 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CLCN2P51788 898 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CTBSQ01459 385 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 PCSK7Q16549 785 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 LDB1Q86U70 411 aaPredicted RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 CNTN4Q8IWV2 1026 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 ZNF786Q8N393 782 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 PPHLN1Q8NEY8 458 aaKnown RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 ANKRD49Q8WVL7 239 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 SLC45A3Q96JT2 553 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 C3orf30Q96M34 536 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 ZFP42Q96MM3 310 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 VAT1Q99536 393 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 MEAF6Q9HAF1 191 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CLK4Q9HAZ1 481 aaKnown RBP11.47□□□□□ -0.57
SRP54-213ENST00000556994 TMEM181Q9P2C4 612 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 CIDEBQ9UHD4 219 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 FBXO5Q9UKT4 447 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 RAD54BQ9Y620 910 aa11.47□□□□□ -0.57
SRP54-213ENST00000556994 MYLKQ15746 1914 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 IPO13O94829 963 aaKnown RBP11.46□□□□□ -0.57
SRP54-213ENST00000556994 WARSP23381 471 aaKnown RBP11.46□□□□□ -0.57
SRP54-213ENST00000556994 KCNC1P48547 511 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 ENTPD1P49961 510 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 TRAP1Q12931 704 aaKnown RBP11.46□□□□□ -0.57
SRP54-213ENST00000556994 FAM83EQ2M2I3 478 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 TECRLQ5HYJ1 363 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 CYHR1Q6ZMK1 362 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 DEFB132Q7Z7B7 95 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 RETREG3Q86VR2 466 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 FUNDC1Q8IVP5 155 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 ALDH16A1Q8IZ83 802 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 CBR4Q8N4T8 237 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 ZMIZ2Q8NF64 920 aa11.46□□□□□ -0.57
SRP54-213ENST00000556994 SH3RF2Q8TEC5 729 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms