RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ZNF284Q2VY69 593 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 PTPN20Q4JDL3 420 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 C2CD6Q53TS8 623 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 ZNF542PQ5EBM4 170 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 PIP5KL1Q5T9C9 394 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 DNAJC24Q6P3W2 148 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 PHLDB2Q86SQ0 1253 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 CLEC14AQ86T13 490 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 NT5DC3Q86UY8 548 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 LGI2Q8N0V4 545 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 SIX6OS1Q8N1H7 587 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 C3orf20Q8ND61 904 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 IFI44Q8TCB0 444 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 MAPK15Q8TD08 544 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
PSEN1-219ENST00000556951 EXTL1Q92935 676 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 BMFQ96LC9 184 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 CPXM1Q96SM3 734 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
PSEN1-219ENST00000556951 ABCG4Q9H172 646 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 GPR27Q9NS67 375 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 SNX12Q9UMY4 172 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 ZFR2Q9UPR6 939 aaKnown RBP12.93□□□□□ -0.34
PSEN1-219ENST00000556951 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 MRFAP1Q9Y605 127 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 ALG6Q9Y672 507 aa12.93□□□□□ -0.34
PSEN1-219ENST00000556951 A0A1W2PQU0 124 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 TCRBV5S1A1TA0A578 114 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 TMEM191CA6NGB0 347 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 SIGLEC16A6NMB1 481 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
PSEN1-219ENST00000556951 MCF2LO15068 1137 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 NOBOXO60393 691 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 ERBB2P04626 1255 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 SLC1A1P43005 524 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 ACADSBP45954 432 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 RPL34P49207 117 aaKnown RBP12.92□□□□□ -0.34
PSEN1-219ENST00000556951 DUSP3P51452 185 aaPredicted RBP12.92□□□□□ -0.34
PSEN1-219ENST00000556951 MESDQ14696 234 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 SYPL2Q5VXT5 272 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 GUSBP11Q6P575 273 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 GCNT7Q6ZNI0 430 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 TMEM110Q86TL2 294 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 XYLT1Q86Y38 959 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 SRRM1Q8IYB3 904 aaKnown RBP12.92□□□□□ -0.34
PSEN1-219ENST00000556951 OR52K2Q8NGK3 314 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 OR8D1Q8WZ84 308 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 GRAMD1AQ96CP6 724 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 IFT43Q96FT9 208 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 HSFY1Q96LI6 401 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 SELENOOQ9BVL4 669 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 USP29Q9HBJ7 922 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 PREBQ9HCU5 417 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 KLF15Q9UIH9 416 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 ANAPC7Q9UJX3 599 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 NAALADL1Q9UQQ1 740 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 TLR6Q9Y2C9 796 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 MTORP42345 2549 aa12.92□□□□□ -0.34
PSEN1-219ENST00000556951 ABCA2Q9BZC7 2435 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 EME2A4GXA9 379 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 TMEM110-MUSTN1A8MSY1 372 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 MIF4GDA9UHW6 222 aaKnown RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 CES2O00748 559 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PROSCO94903 275 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 CTSLP07711 333 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 KRT3P12035 628 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 TACR2P21452 398 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PDX1P52945 283 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 TERF1P54274 439 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 SRSF6Q13247 344 aaKnown RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 NNTQ13423 1086 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 EIF4EBP2Q13542 120 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 SLC12A1Q13621 1099 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 FZD2Q14332 565 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 DLG2Q15700 870 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PERM1Q5SV97 790 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PPP1R15BQ5SWA1 713 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 FAM46CQ5VWP2 391 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 RNF219Q5W0B1 726 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 RAP1GAP2Q684P5 730 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 CXorf57Q6NSI4 855 aaKnown RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 NEK5Q6P3R8 708 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 DCUN1D2Q6PH85 259 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 ZDHHC17Q8IUH5 632 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 ARRDC3Q96B67 414 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 CCDC97Q96F63 343 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 HES6Q96HZ4 224 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PBKQ96KB5 322 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 OSBPL9Q96SU4 736 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 PRMT1Q99873 361 aaKnown RBP12.91□□□□□ -0.34
PSEN1-219ENST00000556951 CALN1Q9BXU9 219 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 SLC25A18Q9H1K4 315 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 ST7Q9NRC1 585 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 TMPRSS4Q9NRS4 437 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
PSEN1-219ENST00000556951 OR51B4Q9Y5P0 310 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms