RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 EBF3Q9H4W6 596 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 CCDC86Q9H6F5 360 aaKnown RBP5.42□□□□□ -1.54
ATXN3-244ENST00000556898 HPS4Q9NQG7 708 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 C1GALT1Q9NS00 363 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 DTLQ9NZJ0 730 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 STOML2Q9UJZ1 356 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 LSM7Q9UK45 103 aaKnown RBP5.42□□□□□ -1.54
ATXN3-244ENST00000556898 ANGPTL2Q9UKU9 493 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 DNPEPQ9ULA0 475 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 RAB23Q9ULC3 237 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 TTC7AQ9ULT0 858 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-244ENST00000556898 NUMBLQ9Y6R0 609 aa5.42□□□□□ -1.54
ATXN3-244ENST00000556898 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-244ENST00000556898 COL4A3Q01955 1670 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CTAGE15A4D2H0 777 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ZSCAN5CA6NGD5 496 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 WASH4PA8MWX3 477 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RASA4BC9J798 803 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 NEDD8-MDP1E9PL57 170 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 H7C0C1 242 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 J3KR12 359 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 APOC4-APOC2K7ER74 178 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DFFAO00273 331 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TTI1O43156 1089 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RASA4O43374 803 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RAD51CO43502 376 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 SNAP91O60641 907 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LRP3O75074 770 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TJP3O95049 919 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 APOC2P02655 101 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CYP17A1P05093 508 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RETP07949 1114 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RHOXF2BP0C7M4 288 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CTAGE8P0CG41 777 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RBP3P10745 1247 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TCF3P15923 654 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 JUNBP17275 347 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 PFKLP17858 780 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RAB6AP20340 208 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TGM2P21980 687 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 HOXD9P28356 352 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 GDI1P31150 447 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CD70P32970 193 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CETN2P41208 172 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CSKP41240 450 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RPS9P46781 194 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ATP5OP48047 213 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 SOX9P48436 509 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 IFNAR2P48551 515 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 HCAR3P49019 387 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 VPS41P49754 854 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 PAPOLAP51003 745 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 SLC7A5Q01650 507 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CKAP4Q07065 602 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 MESP2Q0VG99 397 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LMAN2Q12907 356 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TFDP2Q14188 446 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 UBXN2BQ14CS0 331 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DHCR24Q15392 516 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 OASLQ15646 514 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 MLF2Q15773 248 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CYP1B1Q16678 543 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ANO4Q32M45 955 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RNF219Q5W0B1 726 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 AFMIDQ63HM1 303 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CXorf57Q6NSI4 855 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CCDC137Q6PK04 289 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TMCO3Q6UWJ1 677 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LRRC31Q6UY01 552 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ZNF572Q7Z3I7 529 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CTAGE6Q86UF2 777 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 SFTPA1Q8IWL2 248 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CTAGE4Q8IX94 777 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ADGRG2Q8IZP9 1017 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 APCDD1Q8J025 514 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CPXM2Q8N436 756 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CEP112Q8N8E3 955 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RTL3Q8N8U3 475 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 MNS1Q8NEH6 495 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 SLC35B2Q8TB61 432 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 DDI1Q8WTU0 396 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 OSCP1Q8WVF1 389 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 P3H4Q92791 437 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CHFRQ96EP1 664 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TMA16Q96EY4 203 aaKnown RBP5.41□□□□□ -1.54
ATXN3-244ENST00000556898 HMCESQ96FZ2 354 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 OLFM3Q96PB7 478 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LGMNQ99538 433 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 RHOXF2Q9BQY4 288 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 TMEM121Q9BTD3 319 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 SPON2Q9BUD6 331 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ACSS3Q9H6R3 686 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LRRC19Q9H756 370 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 CATSPERBQ9H7T0 1116 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 ZFP14Q9HCL3 533 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 PARD6AQ9NPB6 346 aa5.41□□□□□ -1.54
ATXN3-244ENST00000556898 LTB4R2Q9NPC1 389 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms