RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 RAD51Q06609 339 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 MMRN1Q13201 1228 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 DPYSL3Q14195 570 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 RFTN1Q14699 578 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 ST3GAL2Q16842 350 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 TMEM52BQ4KMG9 183 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 HS1BP3Q53T59 392 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 TMCO4Q5TGY1 634 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 TMCO3Q6UWJ1 677 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 Q6ZSR6 202 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 LZTR1Q8N653 840 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 EID2Q8N6I1 236 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 TP53I13Q8NBR0 393 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 ECHDC3Q96DC8 303 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 FEM1CQ96JP0 617 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF599Q96NL3 588 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 PSKH2Q96QS6 385 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 TUBGCP5Q96RT8 1024 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 CHP1Q99653 195 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 WRAP53Q9BUR4 548 aaKnown RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 CINPQ9BW66 212 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 DEF6Q9H4E7 631 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 SPTLC3Q9NUV7 552 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 KLHL11Q9NVR0 708 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 UCKL1Q9NWZ5 548 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 RCOR3Q9P2K3 495 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-224ENST00000556737 UVRAGQ9P2Y5 699 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 HS3ST3A1Q9Y663 406 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 SHROOM3Q8TF72 1996 aa10.43□□□□□ -0.74
SHMT2-224ENST00000556737 COL27A1Q8IZC6 1860 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 ARID1BQ8NFD5 2236 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 MYO1FO00160 1098 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 TRAFD1O14545 582 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 ENC1O14682 589 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 MMP20O60882 483 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 PALMO75781 387 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 PRKCGP05129 697 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 H2AFZP0C0S5 128 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 TMEM253P0C7T8 217 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 DGKAP23743 735 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 MAN1A1P33908 653 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 RABIFP47224 123 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SUOXP51687 545 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 CDH6P55285 790 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SLC10A7Q0GE19 358 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 RALGDSQ12967 914 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 DNAJC3Q13217 504 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 FZD2Q14332 565 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 LBRQ14739 615 aaKnown RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 GRM3Q14832 879 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 PROX2Q3B8N5 592 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 ATP13A4Q4VNC1 1196 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 NCBP2-AS2Q69YL0 99 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 BRAT1Q6PJG6 821 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 H2AFVQ71UI9 128 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SRLQ86TD4 932 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 TTC7BQ86TV6 843 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 CAMK1DQ8IU85 385 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SLC25A45Q8N413 288 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 PGBD5Q8N414 524 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 FAM174AQ8TBP5 190 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 HCAR2Q8TDS4 363 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 CTNNBL1Q8WYA6 563 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 CENPTQ96BT3 561 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 FAF2Q96CS3 445 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 IFT43Q96FT9 208 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 CNDP2Q96KP4 475 aaKnown RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 ZNF641Q96N77 438 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 KCNF1Q9H3M0 494 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SUV39H2Q9H5I1 410 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 PCDH12Q9NPG4 1184 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 MBNL1Q9NR56 388 aaKnown RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 CTTNBP2NLQ9P2B4 639 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SEPT3Q9UH03 358 aa10.42□□□□□ -0.74
SHMT2-224ENST00000556737 PNMA8BQ9ULN7 279 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-224ENST00000556737 SPTY2D1-AS1A0A0U1RR47 76 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 TTC24A2A3L6 582 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 GOLGA8CPA6NN73 597 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 TRIM38O00635 465 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 NEMP1O14524 444 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 RIOK3O14730 519 aaKnown RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 FPGTO14772 594 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 PIAS2O75928 621 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 MTA2O94776 668 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 IPO7O95373 1038 aaKnown RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 LDOC1O95751 146 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 CAPNS1P04632 268 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 C6P13671 934 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 NME1P15531 152 aaKnown RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 GM2AP17900 193 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 SERPINA4P29622 427 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 SERPINB6P35237 376 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 GJC1P36383 396 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 AP1S1P61966 158 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 CCZ1BP86790 482 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 CCZ1P86791 482 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 NSUN2Q08J23 767 aaKnown RBP eCLIP10.41□□□□□ -0.74
SHMT2-224ENST00000556737 ELP6Q0PNE2 266 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 SGCGQ13326 291 aa10.41□□□□□ -0.74
SHMT2-224ENST00000556737 KRT81Q14533 505 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms